Streptomyces ferrugineus: IM697_12750
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Entry
IM697_12750 CDS
T07428
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfeu
Streptomyces ferrugineus
Pathway
sfeu00040
Pentose and glucuronate interconversions
sfeu01100
Metabolic pathways
sfeu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IM697_12750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM697_12750
Enzymes [BR:
sfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
IM697_12750
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QOV39173
UniProt:
A0A7M2SUI5
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Position
2797752..2799047
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AA seq
431 aa
AA seq
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MRLRHVIAATALLGLLGVPAHADEGRDISRDALPANDGWAAADGGTTGGSTADDAHVFTV
RDRSELVRALDGGSDTPKIIRIAGTIDANTDDDGDRLTCADYATDGYSPKQYLAAYDPRT
WGSAKPSGPQEEARKASAARQAERVQLAVGSNTTIVGLGDDAVLKGGSLQVKGANNVIIR
NLELRDAYDCFPVWQPNSGGLGDWKTAYDNIWLRGATHVWIDHVTVSDKGHPDEKEPTYF
ARNYLRHDGLLDITNASDLITVSWSRFADHDKAMLIGNGDTATGDRGKLRVTLHHNEFES
LVQRAPRVRFGQVHLYNNRYVVPADAHDYRYSIGVGAESRIHAENNAFHTPGHIEVADLV
KSWNGTALHQTGTLFNGYPVDLLSIHNAYNSGSERDLTADVGWTPTLHGKIDSAGTADRE
VARGAGAGRIP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagactccgtcacgtcatagccgccaccgccctgctgggactgctcggcgtcccggcc
cacgccgacgagggccgtgacatcagccgcgacgccctgcccgcgaacgacggctgggcg
gcggccgacggtggtaccacggggggttccaccgccgacgacgcccacgtcttcaccgta
cgcgaccgcagtgagctggtccgcgccctcgacggcggcagcgacaccccgaagatcatc
aggatcgccgggaccatcgacgccaacaccgacgacgacggcgaccgcctcacctgcgcc
gactacgccaccgacggctacagccccaagcagtatctggccgcctacgacccccgcacc
tggggctcggccaagcccagcggcccgcaggaggaggcgcgcaaggcgtcggccgcccgg
caggccgagcgggtccagctggccgtcggctccaacaccaccatcgtcggactcggcgac
gacgccgtcctcaagggcggcagcctccaggtcaagggcgcgaacaacgtcatcatccgc
aacctcgaactccgcgacgcctacgactgcttccccgtctggcagcccaactccggcggc
ctcggcgactggaagacggcgtacgacaacatctggctgcgcggcgccacccacgtctgg
atcgaccacgtcaccgtcagcgacaagggccacccggacgagaaggagcccacctacttc
gcccgcaactacctccgccacgacggcctgctggacatcaccaacgcctccgacctgatc
accgtctcctggagccggttcgccgaccacgacaaggcgatgctcatcggcaacggcgac
acggcgacgggggaccgcggcaagctgcgcgtcaccctgcaccacaacgagttcgagtcc
ctcgtccagcgcgccccgcgcgtccgcttcggacaggtgcacctctacaacaaccggtac
gtcgtcccggccgacgcccacgactaccgctactccatcggtgtcggcgccgaatcgcgg
atccacgccgagaacaacgccttccacacccccggccacatcgaggtcgccgacctggtc
aagagctggaacggcaccgcgctgcaccagaccggcacgctcttcaacggctacccggtc
gacctgctctcgatccacaacgcctacaactccggcagcgagcgtgatctcacggccgac
gtcggctggacacctaccctgcacggaaagatcgacagcgccgggacggccgaccgagag
gtggcacgcggcgcgggcgcagggaggatcccatga
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