Mammaliicoccus fleurettii: FOB90_08925
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Entry
FOB90_08925 CDS
T06358
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sff
Mammaliicoccus fleurettii
Pathway
sff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOB90_08925 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sff03021
]
FOB90_08925 (rpoB)
03400 DNA repair and recombination proteins [BR:
sff03400
]
FOB90_08925 (rpoB)
Enzymes [BR:
sff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOB90_08925 (rpoB)
Transcription machinery [BR:
sff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOB90_08925 (rpoB)
DNA repair and recombination proteins [BR:
sff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOB90_08925 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
SH3_5
ATP-grasp_6
Motif
Other DBs
NCBI-ProteinID:
QGS46777
LinkDB
All DBs
Position
1876615..1880166
Genome browser
AA seq
1183 aa
AA seq
DB search
MAGQFVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVKVRLVIKETGEVKDQEVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFNEKLDKNGRVNYDATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGYSTDQEIIDLIGDNEYLRNTLEKDSTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNTDTG
EIVAEEGTVLDRRKLDEIMDVLETNANAQVYELPNSIIDEPVEVQSIKVYVPNDDEERTT
TVIGNAFPDSEVKCITPADIVASMSYFFNLLHGIGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDLETNTITDRIDYLTADEEDSYVVAQANSRLDENGRFIDDEIVCRFRGNNT
TMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPESPFVGTG
MEHVAARDSGAAVISKYRGRVEHVQSSEVLVRRLVEENGQEVEGELDRYPLAKFKRSNSG
TCYNQRPIIAAGDVVEKGEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDDRGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDS
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGANDEDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYEAIVKGENISRPSVPESFRVLMKELQSLGL
DVKVMDEQDNEIEMRDLDEDDIPDRKVNIQPSTVPESQKEFNE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtcaatttgtccaatatggaagacatcgtaaacgtagaaactacgcaagaatt
tcagaagttttagagttaccaaacttaattgaaattcaaacaaaatcgtatgattggttc
ttaaaagaaggtcttttagaaatgttccgcgacatttctccaatcgaagacttcacaggt
aatctttcattggaatttgtagattatagattaggtgaaccgaagtatgatttagaagaa
tcaaaaaaccgtgatgcaacatatgcggcgccattacgcgttaaagttcgtctagttatt
aaagaaacaggcgaagtgaaagatcaagaagtatttatgggagatttccctttaatgaca
gaaacaggtacttttgtaattaatggtgcggaacgtgttattgtatctcaattagttcgt
tcaccgtctgtctactttaatgaaaagttagataaaaatggtcgtgtgaactatgatgcg
actgttattcctaaccgcggtgcatggttagagtatgaaacagatgcgaaagatgttgtt
tatgtacgtattgatagaacaagaaagttaccattaacagtattattacgtgcattaggt
tattcaactgaccaagaaatcattgatttaattggtgacaatgaatacttaagaaacact
ttagaaaaagatagcactgaaaatacagaacaagcattattagaaatttatgaacgttta
cgtccaggtgaaccaccaacggtagaaaatgctaaaagcttattgtattctcgtttcttt
gaccctaaacgttatgatttagcaagcgtaggacgttataaagcaaataaaaaattacat
ttaaagcaccgcctattcaatcaaaaattagctgaacctattgtaaatactgacacaggt
gaaattgttgctgaagaaggcacagttttagatcgtcgtaagttagacgaaatcatggat
gttcttgaaacaaatgctaacgcacaagtttacgaacttcctaatagtattatcgatgaa
cctgtagaagtacaatctattaaagtttatgtaccaaatgatgatgaagaacgtacaaca
actgtgattggtaatgcattcccagattcagaagtgaaatgtattacacctgctgacatc
gtggcgtctatgtcatacttctttaacttattgcatggtatcggttatacagatgacatt
gaccatcttggtaatcgtcgtttacgttcagttggtgaattgttacaaaaccaattccgc
attggtttatcaagaatggaacgtgtggtacgtgaaagaatgtctattcaagatactgac
tcaatcacaccacaacaattgattaacattcgcccagtgattgcatcaattaaagagttc
tttggtagctcacaattatcacaattcatggaccaagcgaacccacttgctgagttaaca
cacaaacgtcgtttatcagctttagggcctggtggtttaacacgtgaacgtgcacaaatg
gaagttcgtgacgtacactattctcactatggccgtatgtgtccaatcgagacaccagag
ggtccaaacattggtttgatcaactcactttcaagttatgcacgtgtgaatgaatttggt
ttcattgaaactccatacagaaaagtagaccttgaaacaaacacaattacagaccgtatt
gattaccttactgctgatgaagaagacagttatgttgttgcccaagcgaactcaagactt
gatgaaaacggacgttttatcgatgacgaaatcgtttgtcgtttccgtggtaacaacaca
actatggctaaagaaaaaatggactacatggacgtatcgcctaaacaagttgtttcagct
gcgacagcatgtattccgtttttagaaaacgatgactctaaccgtgcattgatgggtgcg
aacatgcaacgtcaagcagtaccattgttaaacccagaatcaccattcgtaggtacaggt
atggagcacgtagccgcacgtgattcaggtgctgctgttatttctaagtatcgtggccgc
gttgaacatgttcaatcaagcgaagttttagtacgtcgcttagttgaagaaaatggtcaa
gaagtagaaggtgaattagaccgttatccattagcgaaattcaaacgttcaaactcaggt
acatgttataaccaacgtcctattatcgcagcaggcgacgttgttgaaaaaggcgaaatt
cttgcagatggtccatctatggaactcggagaaatggccttaggtcgaaacgttgttgtt
ggatttatgacttgggatggttataactacgaggacgccgtaattatgagtgagcgcctt
gttaaagatgacgtttatacttcaattcatatcgaggaatatgaatctgaagcacgagac
acaaaacttgggcctgaagaaattactcgcgatataccaaacgtttcagaaaacgcactg
aaaaacttagatgaccgcggtattgtatacgttggagcagaagtaaaagatggcgatata
ttagtcggtaaagtgacgcctaaaggtgttactgaattgacagcagaagaacgcctatta
catgcgatctttggcgaaaaagcacgtgaagttcgtgatacgtcattacgcgtaccacac
ggtgcaggtggtattgttcttgatgttaaagtgtttaaccgtgaagaaggcgatgattca
ctttcaccaggtgtgaaccaacttgttcgtgtgtacatcgttcaaaaacgtaaaattcat
gtaggggacaaaatgtgtggtcgtcacggtaacaaaggtgtcatctctaaaattgttcct
gaagaagatatgccgtacttaccagatggccgtccaattgacatcatgttaaacccacta
ggtgtaccatcacgtatgaatatcggacaagttttagagttgcatttaggtatggctgct
aaaaacttaggtattcacgttgcttcaccagtatttgacggtgccaacgatgaagacgta
tggtctacaattgaagaagcaggtatggcacgtgacggtaaaacagtactttacgatggc
cgtacaggagaaccatttgacaaccgtatttcagttggtgtgatgtacatgttgaaactt
gcgcacatggtagatgataaacttcacgcacgttcaactggaccatattcattagttaca
caacaacctcttggtggtaaagcacaattcggtggacaaagatttggtgagatggaggta
tgggcactcgaagcttatggtgcagcatacacacttcaagagatcttaacttacaaatca
gatgacactgtaggtcgtgtgaaaacttatgaagcgattgttaaaggtgaaaacatttca
agaccaagtgttcctgaatcattccgcgtattgatgaaagagctacaaagtttaggcctt
gatgtgaaagtgatggatgaacaagacaatgaaattgaaatgcgcgatttagatgaggat
gatattccagatcgtaaagtcaatattcaaccatctactgttccagaatctcaaaaagaa
tttaacgaataa
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