Serratia fonticola GS2: AV650_23130
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Entry
AV650_23130 CDS
T04716
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfg
Serratia fonticola GS2
Pathway
sfg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV650_23130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfg03000
]
AV650_23130
03400 DNA repair and recombination proteins [BR:
sfg03400
]
AV650_23130
Enzymes [BR:
sfg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AV650_23130
Transcription factors [BR:
sfg03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AV650_23130
DNA repair and recombination proteins [BR:
sfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV650_23130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_23
HHH
Motif
Other DBs
NCBI-ProteinID:
ALX96245
LinkDB
All DBs
Position
complement(5027585..5029093)
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AA seq
502 aa
AA seq
DB search
MNKKLTPSDAMKNQQQALYSALSARDRKFDGRFFVGVSSTGIYCRPVCSARTPKIENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEQLATRL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDLPLSEVAFAAGFGSLRRFNEL
FKARYRLIPSVLRSTAGRSERAATSGLVFHLGYRPPYDWLRMLGFLQTRAVSGVESVAGQ
QYCRSIAVDQGGVEYCGWVSVQPEEARNRVRVEIAPSLSRVTTEVLRRIRQLFDLDAAPD
RICEALGTLAADAPGLRLPGCVNSFEQATRAVLGQLVSVKMAATFAGRMAERWGTALEQP
YGDITHVFPQAVRIAQLQPEDLRLLGVQLKRAAALIEIARRITEGRLQLDNVLDIEQGIK
ELTSLPGIGSWTASYIAMRAWSWPDVFLAGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNDRWAPSVNTEVAAAE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaactgactccgagcgatgccatgaagaatcaacaacaggcgctgtatagc
gcgctgagtgcgcgtgaccgtaagtttgacggacgattttttgtcggtgtctcctccacc
ggtatctattgcaggccggtatgtagtgcccgcacgccgaaaatcgaaaattgtaccttt
tatcccagcgccgccgccgccgaactggccggttttcgcccctgcctgaaatgccgcccc
gaattggctccagggctggcgttgatcgatctgggcaatcgctatgctcaggttgcggtt
cagctgattgagcagggctatctttcagagcatagctgtgaacagctggctacccgtctg
ggaatttccgatcgccatctgcggcgcatttttgccgagcagttcggcgcttcccccatt
gattacgcccagtcgcaccgtctgttgcaggccaaacggctgctggcggataccgatttg
cccctgagcgaggtggcgtttgccgccgggtttggcagcctgcggcgtttcaatgagctg
tttaaggcccgttatcgcctgatcccttcggtattgcgcagcactgctggccgaagtgag
cgtgccgccaccagcggactggtgtttcatctggggtatcggccaccttacgattggctg
cgtatgttggggttcttacagactcgtgcggtcagcggcgtggaaagcgttgccggtcaa
caatactgtcgttcgatcgcggtggatcagggcggcgtcgaatattgcggttgggtgagc
gtccagccggaagaggcgcgaaaccgggtgcgggtggaaattgccccatcgctcagcaga
gtgacgaccgaagtcctgcggcgcattcgccaactgttcgatctggatgccgcgccggac
cgcatttgcgaggcgttaggtacgttagcggcggatgcgcccggcttacgtttgccaggc
tgcgtcaacagctttgagcaggctacgcgtgcggtgttggggcagttggtcagcgtcaag
atggcggctacctttgccggacggatggccgaacgctggggaacggcgctggagcagccg
tatggcgatatcactcatgtttttccgcaggcggtgcggatcgcccagttgcaaccggaa
gatctgcgtctattgggcgtacagctgaagcgcgcggctgcgctgattgaaattgcacgc
aggataacagaagggcgtttgcagctggataacgtgctagatatcgaacagggtatcaag
gagttaacttcattaccggggataggcagttggaccgccagctatatcgcgatgcgggcc
tggtcatggccggacgtttttctggcgggggactatctgatcaaacagcgtttccccggc
atgacgccgcgccagattgagcgctatgccgaacgctggcggccttggcgttcctacgcc
accttgcatctgtggcataacgatcgttgggctccttcagtgaataccgaagtagccgcc
gctgagtaa
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