Sinorhizobium fredii HH103: SFHH103_00976
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Entry
SFHH103_00976 CDS
T01731
Symbol
hupB
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sfh
Sinorhizobium fredii HH103
Brite
KEGG Orthology (KO) [BR:
sfh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfh03032
]
SFHH103_00976 (hupB)
03036 Chromosome and associated proteins [BR:
sfh03036
]
SFHH103_00976 (hupB)
03400 DNA repair and recombination proteins [BR:
sfh03400
]
SFHH103_00976 (hupB)
DNA replication proteins [BR:
sfh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SFHH103_00976 (hupB)
Chromosome and associated proteins [BR:
sfh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SFHH103_00976 (hupB)
DNA repair and recombination proteins [BR:
sfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SFHH103_00976 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CCE95475
UniProt:
G9A419
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All DBs
Position
1056744..1057016
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AA seq
90 aa
AA seq
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MNKNELVSAVAEKAGLSKADASSAVDAVFETIQGELKSGGDIRLVGFGNFSVTRREASKG
RNPSTGAEVDIPARNVPKFTAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatgagctcgtgtctgccgttgccgagaaggccggtctttccaaggccgat
gcgtcttccgctgttgatgcagtgtttgagaccattcagggcgaactgaagagcggtggc
gacatccgcctcgtaggctttggcaacttctccgtgacccgccgcgaagcgagcaagggc
cgcaacccgtcgacgggtgcggaagttgacatcccggcacgcaacgtgccgaagttcacg
gccggcaagggcctgaaggacgccgtcaactaa
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