Streptomyces ficellus: EIZ62_07465
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Entry
EIZ62_07465 CDS
T06929
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sfic
Streptomyces ficellus
Pathway
sfic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIZ62_07465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfic03019
]
EIZ62_07465
03400 DNA repair and recombination proteins [BR:
sfic03400
]
EIZ62_07465
Enzymes [BR:
sfic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIZ62_07465
Messenger RNA biogenesis [BR:
sfic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIZ62_07465
DNA repair and recombination proteins [BR:
sfic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIZ62_07465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_30
DUF8096
PglZ_C
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QGV78105
UniProt:
A0A6I6FGB1
LinkDB
All DBs
Position
1710813..1712993
Genome browser
AA seq
726 aa
AA seq
DB search
MEQTSNAGPSTLRAAADTVLARLVGDGSGTARLREDQWRAIEALVAEKRRALVVQRTGWG
KSAVYFVATSLLRERGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSSNTEEWESIQQ
EVTEGTVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLR
TMLAELPSGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLSVLRLPD
AAHRLAWLADHLGELPGSGIIYTLTVAAAEEVTAYLRQCGHTVASYTGRTENADRQQAEE
DLLANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLP
GKEDEAIWQYFASVAFPPEEQVRRTLDVLAHADRPLSLPALEPLVELRRTRLETMLKVLD
VDGAVHRVKGGWTGTGQPWRYDSERYAWVARQREAEQQAMRDYASTTACRMEFLRRQLDD
EEAAPCGRCDNCAGSRFDAKVSAAALDAARGELGRPGVEVEPRKMWPTGLPAAGVDLKGR
IPAGELSFAGRALGRLSDIGWGNRLRPMLAPGAADGPVPDDVVDAVVRVLADWAKAPGGW
ASGAPDAPPRPVGIVTVASHGRPQLVGSLGRRIAEVGRMPLLGSVAYVPEAADLRISRTN
SAQRVLGLHRALTVPPELTEQLEAAGGPVLLVDDLSDSGWTLAVAARLLRRAGAEGVFPL
VLAVQG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagcagacgagcaacgcaggacccagcactctccgcgcagcggccgacaccgtgctc
gcccgcctggtcggggacggcagcggtaccgcacggctgcgggaggaccagtggcgtgcg
atcgaggcgctggtggcggagaagcggcgggcgctcgtcgtgcagcgcaccggctggggc
aagtccgcggtgtacttcgtggcgacgtcgctgctgcgggagcggggcagcggcccgacg
gtgatcgtgtcgccgctgctcgcgctgatgcgcaaccaggtggaggcggcggcccgggcc
ggcatccgcgcacggacgatcaattcctccaacaccgaggagtgggagtcgatccagcag
gaggtgaccgagggcacggtggacgtgctgctcgtcagccccgaacggctcaacaacccg
gacttccgcgaccaggtcctgccccggctcgccgccgcgaccgggctgctcgtggtcgac
gaggcgcactgcatctccgactggggccacgacttccggcccgactaccgccggctgcgc
accatgctcgccgagctgccgtccggcgtccccgtcctggccaccaccgccacggccaac
gcccgggtgacggcggacgtggccgaacagctgggtaccggcgcgggcacggacgcgctc
gtcctgcgcggcccgctggaccgcgagagcctgagcctgagcgtgctccggctgcccgac
gccgcccaccgcctggcctggctcgccgaccacctcggggagctgcccggctcggggatc
atctacacgctgacggtcgcggcggccgaggaggtcacggcgtacctgcgccagtgcggc
cacaccgtggcctcgtacacgggccgcacggagaacgcggaccgccagcaggccgaggag
gacctgctggccaaccgggtcaaggcgctggtggcgacctcggcgctcggcatgggcttc
gacaagccggatctcgggttcgtcgtccacctcggctcgccctcctcccccatcgcgtac
taccagcaggtgggccgggcgggccgcggtgtggagcacgcggaggtgctgctgctgccc
ggcaaggaggacgaggcgatctggcagtacttcgcctcggtcgccttcccgcccgaggag
caggtgcgccggacgctcgacgtgctggcgcacgccgaccgccccctgtccctgccggcc
ctggagccgctggtcgagctgcgccgcacccgtctggagacgatgctgaaggtcctcgac
gtggacggcgcggtgcaccgggtgaagggcggctggaccggcacgggacagccctggcgt
tacgactccgagcggtacgcgtgggtggcgcgacagcgggaggccgagcagcaggccatg
cgtgactacgcgtcgacgacggcgtgccggatggagttcctgcggcggcagctggacgac
gaggaggcggccccgtgcggccgttgcgacaactgcgcgggctcccgcttcgacgccaag
gtgtccgccgcggcgctcgacgccgcgcgcggtgagctgggccggccgggcgtggaggtg
gaaccgcgcaagatgtggccgaccgggttgccggcggccggggtcgacctcaaggggcgc
attcccgccggggagctgtcgttcgcggggcgggcgctcgggcgcctgtcggacatcggc
tggggcaaccggctgcggccgatgctggcgccgggcgcggccgacgggccggtaccggac
gacgtggtggacgcggtggtgcgggtgctggccgactgggccaaggcaccgggcggttgg
gcctccggtgcgccggacgccccgccgcggcccgtgggaatcgtcacggtcgcctcgcac
ggcaggccgcagttggtcggctcgctgggccggcggatcgccgaggtgggccggatgccg
ctgctggggtccgtcgcgtacgtgcccgaggccgcggacctccgcatctcacgcaccaac
agcgcgcaacgggtgctggggctccaccgggcgctgaccgtgccgcccgagctgacggag
cagttggaggcggcaggcggcccggtgctgctggtcgacgacctgtcggacagcggctgg
acgctcgccgtggcggcgaggctgctgcgccgggcgggagcggagggggtgtttccgctg
gtcctcgccgttcagggatga
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