Streptomyces finlayi: F0344_14020
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Entry
F0344_14020 CDS
T09573
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sfiy
Streptomyces finlayi
Pathway
sfiy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfiy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F0344_14020 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfiy03021
]
F0344_14020 (rpoB)
03400 DNA repair and recombination proteins [BR:
sfiy03400
]
F0344_14020 (rpoB)
Enzymes [BR:
sfiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F0344_14020 (rpoB)
Transcription machinery [BR:
sfiy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F0344_14020 (rpoB)
DNA repair and recombination proteins [BR:
sfiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F0344_14020 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QNE75597
UniProt:
A0A7G7BJT2
LinkDB
All DBs
Position
complement(3061554..3065039)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNHGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEA
ALDSGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIEECKERDFTFAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSSKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLNAGVLTSDDVIATIKYLVKLHAGETETVGESGREIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFIETPYRKVVDGQVTDDVDYITADEEDRYVIAQANALLSEELRF
TEPRVLVRRRGGEVDYVPGTDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQEVSADYITVTNDDGTYTTYRIAK
FMRSNQGTSVNQKVVVSEGDRVVAEQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVTAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKIIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLGDEWAQRLQTIGADKVAPGTNVATP
VFDGAREDEITGLFKATIPNRDGDRLVQPSGKANLFDGRSGEPFPEPVSVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaaccacggcgccagcaccgccccg
ctgcgcatctcttttgcaaagatcaaggagcccctcgaggttccgaacctcctcgcgctg
cagaccgagagctttgactggctcctcggtaatgccgcctggaaggctcgcgtcgaggct
gctctggacagtggacaagacgtccccaccaagtccggcctggaggaaatcttcgaggag
atttcaccgatcgaggacttctccgggtcgatgtcgcttacgttccgcgaccaccgcttc
gagcccccgaagaactccatcgaagagtgcaaggagcgcgacttcacgttcgccgcgccg
ctcttcgtcaccgctgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtcgtgtcgcagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctcctccaagatcatcccttcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgttctcctgaaggctctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgcttctcgacatctaccgcaagctgcgcccgggcgagccgcccacccgcgaggctgct
cagacgctgctcgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtgaacaagaagctcggcgccgacgagccgctgaacgccggcgtgctcacc
agtgacgacgtcatcgcgacgatcaagtacctggtcaagctgcacgcgggcgagaccgag
acggtcggggagtcgggccgggagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgtaacgtcggcgagctcatccagaaccaggtccgtacgggtctggct
cgtatggagcgcgtcgtgcgtgagcggatgacgacccaggacgtcgaggccatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgc
ctgtcggctcttggcccgggtggcctgtcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccgtcccactacggacgcatgtgcccgatcgagacccctgaaggcccgaacatc
ggtctgatcggttcgctcgcctcgtacggacgcgtcaacgcgttcggtttcatcgagacg
ccgtaccgcaaggtcgtcgacggtcaggtcacggacgacgtcgactacatcacggccgac
gaagaagaccgttacgtcatcgcccaggcgaacgcgctcctctccgaggagctgcgcttc
accgagccgcgcgtcctggtccgccgtcgtggcggagaggtcgactacgtgcctggcacg
gacgtcgactacatggacgtctcgccgcgccagatggtgtccgtcgccaccgcgatgatc
cccttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gcggtgccgctcatcaagtccgaggcgccgctcgtcggcacgggcatggagtaccgctgc
gccaccgacgccggtgacgtgctcaaggcggagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccgtcacgaacgacgacggcacgtacaccacgtaccgcatcgccaag
ttcatgcgctccaaccagggcacctcggtcaaccagaaggttgtcgtctccgagggcgac
cgggtcgtcgccgaacaggtactcgccgacggaccggccaccgagaacggtgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccgtgggagggtcacaactacgaggacgcg
atcattctttcgcagcgcctcgtacaggacgacgtcctctcctcgattcacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggcccggaggagatcacccgggacatcccg
aacgtctccgaagaggtcctcgcggacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcacggccggagacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acgccggaggagcgtctgctccgtgcgatcttcggtgagaaggcgcgcgaggtgcgcgac
acctcgctgaaggtcccgcacggtgagatcggcaagatcatcggtgtccgggtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctggtccgcgtctacgtcgcg
cagaagcgcaagatcaccgatggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctcgaagatcctgccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaaccccctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcggtgacgagtgggcc
cagcgcctgcagaccatcggcgccgacaaggtcgccccgggcaccaacgtcgcgaccccg
gtcttcgacggtgcccgtgaggacgagatcaccggcctcttcaaggccacgatcccgaac
cgcgacggagaccggctggtccagccctcgggcaaggccaacctgttcgacggccgctcc
ggcgagccgttcccggaaccggtctcggtcggttacatgtacatcctgaagctccaccac
ctcgtcgacgacaagctccacgctcgttcgacgggtccgtactccatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggccagcgcttcggtgagatggaggtgtgggcg
cttgaggcttatggcgccgcctacgccctccaggaactgctgaccatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtcgctctgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacacggacgaggacgtcttc
cgcgctgcggaagagctcggtatcgacctgtcccggcgtgagccgagcagcgtcgaagag
gtctga
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