Serratia ficaria: SAMEA4384070_0027
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Entry
SAMEA4384070_0027 CDS
T06444
Symbol
rbsR_1
Name
(GenBank) Ribose operon repressor
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_0027 (rbsR_1)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA4384070_0027 (rbsR_1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_7
CbiJ
Rad10
Motif
Other DBs
NCBI-ProteinID:
SNV78566
UniProt:
A0A240A6R3
LinkDB
All DBs
Position
1:complement(29203..30237)
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AA seq
344 aa
AA seq
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MSSVKAMRASGRATISDVAKTAKTGKTSVSRYLNGEQHLLSDDLKRRIEQAIQQLDYRPS
QMARSLKGGQTRLIGLILADITNPYSVDVMRGIEAACRQHGFTLLVCNTNNEVNQEQHYL
QLLSSYRVEGIVVNAVGMREEALSTLQQSMLPMVLIDRKIPDFDCDVVGLNNHEAATTAT
EHLLQQGFEAILFLSEPIGTVNTRLERLHAFNQTMAQHADLLAERAETPLNDQQQLEQVL
KHFNDGHRGMRKAVISANGALTLQVARAMRRLGIQWGSDIGLLGFDELEWAELAGVGITT
LKQPTYRMGHAALEQLVQRIQGLDAPIGERMFSGELIVRGSTTR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtgtgaaggcaatgcgcgcttcggggcgcgccaccatcagcgatgtggcaaaa
accgccaaaaccggcaaaaccagcgtgtcgcgctatctgaatggtgagcagcatctgctt
tctgacgatctcaaacggcgcatcgagcaggcgatccaacagctcgattaccggccaagc
cagatggcccgcagcctgaagggcggccaaacgcgcctgatcggtctgatcctcgccgac
atcaccaacccctattcggtcgacgtcatgcgcggcatcgaagccgcctgccgccaacac
ggctttaccctgctggtgtgcaacaccaacaacgaggtcaatcaggaacagcactacctg
cagttgctcagcagctatcgggtggagggcatcgtggtcaacgcggtcggcatgcgtgaa
gaagcgctgtcgacgctgcaacagtcgatgctgccaatggtgttgatcgaccgcaaaatc
cccgatttcgactgcgacgtggtgggcctgaacaaccacgaagcggcgaccaccgccacc
gaacacctgctgcaacagggttttgaagccattctgttcctcagcgaaccgatcggcacg
gtcaacacccggctggagcggctgcacgccttcaatcaaaccatggcgcagcatgccgat
ctgctggcagagcgggcggaaaccccgctgaatgaccagcaacagctggaacaggtgctg
aagcacttcaacgacggccatcgcggcatgcgcaaggcggtgatctcggccaacggcgcg
ctgacgctgcaggtggcgcgcgccatgcgccggctgggcattcaatggggcagcgatatc
ggcctgttgggcttcgacgagctggaatgggccgagctggcgggcgtcggcatcaccacg
ctgaaacagccgacctaccgaatgggccatgcggcgctggaacagctggtgcagcgcatt
caggggctcgatgcgccgatcggcgaacggatgttctccggcgaactgatcgtgcgcggc
tccaccacccgctaa
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