Streptomyces formicae: KY5_4786
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Entry
KY5_4786 CDS
T05416
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sfk
Streptomyces formicae
Pathway
sfk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KY5_4786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfk03021
]
KY5_4786
03400 DNA repair and recombination proteins [BR:
sfk03400
]
KY5_4786
Enzymes [BR:
sfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KY5_4786
Transcription machinery [BR:
sfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KY5_4786
DNA repair and recombination proteins [BR:
sfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KY5_4786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ATL29804
UniProt:
A0A291QE99
LinkDB
All DBs
Position
5583150..5586635
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRTASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVEA
ALDSGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTFAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADAPLDAGILTVEDIIASIKYLVKLHAGEVETVGDSGTSIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVEGQVTDDVDYLTADEEDRFVIAQANAPLTDDLHF
AEARVLIRRRGGEIDYVPGTDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLITAEAPLVGTGMEYRCAVDAGDVIKAEKAGVVQEVSADYVTVTNDDGTYTTYRIAK
FSRSNQGTSVNQKVVVDEGARVIEGQVLADGPATEEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLGEEWAQRLQAIGADQVDPGTNVATP
VFDGAREDELAGLLEHTIPNRDGERMVLPSGKAPLFDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcactgcctcgaccgcgaatacgaacaacggcgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaaccttcttgcgctg
cagaccgagagctttgactggctgctcggcaatgacgcgtggaaggctcgtgtcgaggcg
gctctggacagcggacaggacgtccccaccaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtccctgacgttccgcgaccaccgattc
gagcccccgaagaactccatcgacgagtgcaaggagcgcgacttcacgttcgccgccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgatttcccgctcatgacgaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtcgtgtcgcagctggtccgttcgccgggcgtctacttcgattcctcgatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tcggtcaccgttctgctcaaggctctcggttggacgaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctccgtccgggcgagccgccgacccgtgaggccgct
cagaccctgcttgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtcaacaagaagctgggtgcggacgctccgctcgacgcgggcatcctcacg
gtcgaggacatcatcgcctcgatcaagtacctggtgaagctgcacgccggtgaggtcgag
accgttggtgacagcggcacgtcgatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctcatccagaaccaggtccgcacgggtctggct
cgtatggagcgcgtcgtccgcgagcgcatgacgacccaggacgtcgaggcgatcaccccg
cagaccctgatcaacatccgcccggtcgtggcgtcgatcaaggagttcttcggcacctcg
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacgcacaagcgtcgt
ctctcggcactgggtcccggtggtctgtcccgtgagcgggcaggcttcgaggtccgtgac
gtgcacccgtctcactacggccgcatgtgccccattgagactcccgaaggccccaacatc
ggtctgatcggttcgctcgcctcgtacggccgcgtcaacgcgttcggcttcgtcgagacg
ccgtaccgcaaggtcgtcgagggccaggtcaccgacgacgtcgactacctgacggccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctgacggacgacctccacttc
gccgaggcccgcgtcctgatccgccgtcgtggcggagagatcgactacgtgcccggcacg
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatgatc
cccttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgtgccgctgatcaccgccgaggcccccctcgtcggcaccggcatggagtaccgctgc
gcggtcgacgccggtgacgtgatcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacgtcaccgtcacgaacgacgacggcacgtacaccacgtaccgcatcgccaag
ttctcccggtcgaaccagggcacctcggtcaaccagaaggtcgtcgtcgacgagggcgcc
cgcgtgatcgagggccaggtcctggccgacggtcccgcgaccgaagagggcgagatggcc
ctcggcaagaacctgctcgtggcgttcatgccctgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggcccggaggagatcacccgggacatcccg
aacgtctccgaagaggtcctcgccgacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acgccggaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtccgcgac
acctcgctgaaggtgccgcacggcgagatcggcaaggtcatcggtgtccgcgtcttcgac
cgtgaagagggcgacgagctgccgccgggcgtgaaccagctggttcgtgtctacgtggcg
cagaagcgcaagatcacggacggcgacaagctggccggacgtcacggcaacaagggtgtt
atctcgaagatccttccgatcgaggacatgccgttcctcgaggacggaactccggtcgac
atcatcctgaacccgctgggtgtgccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctcgggcctcggcgaggagtgggcg
cagcgcctgcaggccatcggtgccgaccaggtcgaccccggcacgaacgtcgcgaccccc
gtcttcgacggtgcgcgcgaggacgagctggccggtctgctcgagcacacgatcccgaac
cgcgacggcgagcgcatggtgcttccgtccggcaaggcgccgctgttcgacggccgttcc
ggcgagccgttccccgagccgatctcggtcggctacatgtacatcctcaagctgcaccac
ctggtcgacgacaagctccacgctcgctcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggtcagcgcttcggtgagatggaggtgtgggcg
ctggaggcatacggcgccgcgtacgccctccaggagctccttacgatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtcgctctgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgtgacaccgacgaggacgtcttc
cgcgcggcggaggagctcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
