Streptomyces formicae: KY5_6865
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Entry
KY5_6865 CDS
T05416
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
sfk
Streptomyces formicae
Brite
KEGG Orthology (KO) [BR:
sfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfk03021
]
KY5_6865
Transcription machinery [BR:
sfk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KY5_6865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_Crp_2
GerE
HTH_23
MarR
MarR_2
HTH_24
DUF7342
DUF134
HTH_28
HTH_3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ATL31883
UniProt:
A0A291QK98
LinkDB
All DBs
Position
7985640..7986476
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AA seq
278 aa
AA seq
DB search
MRSHTTTVPATRNATTVPARTKRHPHDDAPDTTAAFEQLVEMEDGPERDTLRQEVVEVWL
PMSERLAGRFRNRGESLDDLRQVAALGLVKAVDRYDPRRGTAFESYAVPTVTGEIKRHFR
DHMWTLHVPRRVQDLRNRVRFARQDLAQTVSGRAPTIAEIAEHAQMSEEDAKAGLEALDS
FTALSLDAELPGSEDGYSLSDALGGPDPALDVVIDREAVKPRIAQLPERERTILYMRFFG
DMTQSSIADEMGISQMHVSRLISRCCDRLRDQVMRDAA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcccacacgaccaccgtcccggcgaccaggaacgcgaccaccgtccccgccagg
accaagcggcatccgcacgacgacgccccggacaccacggccgccttcgagcagctcgtc
gagatggaggacggacccgagcgggacaccctgcgccaggaagtcgtcgaggtctggctg
cccatgtccgagcgtctcgcggggcgcttccgcaatcggggcgagtccctggacgacctg
cgccaggtcgcggccctcgggctcgtcaaggcagtggaccgctatgacccccgccgcggc
accgcgttcgagagctacgccgtaccgaccgtcaccggtgagatcaagcggcacttccgc
gaccacatgtggaccctgcacgtgccgcgccgcgtccaggacctgcgcaaccgcgtgcgc
ttcgcccgccaggacctcgcccagacggtctcggggcgcgccccgacgatcgccgagatc
gccgaacacgcgcagatgagcgaggaggacgcgaaggcggggctcgaggcgctcgacagc
ttcaccgccctctccctcgacgcggaactcccgggcagcgaggacggctactcgctgagc
gacgccctcggcgggcccgaccccgcgctcgacgtcgtcatcgaccgcgaggccgtcaag
ccgcgcatcgcgcagttgcccgagcgcgaacgcaccatcctctacatgcggttcttcggc
gacatgacccagagcagcatcgccgacgagatgggcatctcgcagatgcacgtctcgcgg
ctgatcagccgctgctgcgaccggctgcgcgaccaggtgatgcgggacgccgcgtaa
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