Shigella flexneri 301 (serotype 2a): SF0117
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Entry
SF0117 CDS
T00097
Symbol
speD
Name
(RefSeq) S-adenosylmethionine decarboxylase
KO
K01611
S-adenosylmethionine decarboxylase [EC:
4.1.1.50
]
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Pathway
sfl00270
Cysteine and methionine metabolism
sfl00330
Arginine and proline metabolism
sfl01100
Metabolic pathways
Module
sfl_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SF0117 (speD)
00330 Arginine and proline metabolism
SF0117 (speD)
Enzymes [BR:
sfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.50 adenosylmethionine decarboxylase
SF0117 (speD)
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Gene cluster
GFIT
Motif
Pfam:
AdoMet_dc
Motif
Other DBs
NCBI-GeneID:
1025958
NCBI-ProteinID:
NP_706073
UniProt:
P0A7F8
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All DBs
Position
complement(133039..133833)
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AA seq
264 aa
AA seq
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MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIG
ANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYP
ESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHF
IDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSE
RQEITAALWKEMREIYYGRNMPAV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaactgaaactgcatggctttaataatctgaccaaaagtctgagtttttgtatt
tacgatatctgctacgccaaaactgccgaagagcgcgacggttatattgcttatatcgat
gaactctataatgccaaccgtctgaccgaaatcctgtcagaaacctgttccattatcggg
gccaatattcttaacatcgcccgccaggattacgaaccacagggtgccagcgtcactatt
ctggtgagtgaagaaccggttgacccgaaactcatcgacaaaacagaacaccccggccca
ctgccagaaacggtggttgctcatctcgataaaagtcatatttgcgtacatacctacccg
gaaagtcatcctgaaggcggtttatgtaccttccgcgccgatattgaagtctctacctgc
ggcgtgatttctccgctgaaggcgctgaattacctgatccaccagcttgagtccgatatc
gtaaccattgattatcgcgtgcgcggttttactcgcgacattaacggtatgaagcacttt
atcgaccatgagattaattcgattcagaactttatgtctgacgatatgaaggcgctgtat
gacatggtggatgtaaacgtctatcaggaaaatatcttccataccaagatgttgcttaaa
gagttcgaccttaagcactacatgttccacaccaaaccggaagatttaaccgacagcgag
cgccaggaaattaccgctgcgctgtggaaagaaatgcgcgagatttattacgggcgcaat
atgccagctgtttaa
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