Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01893
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Entry
SPHFLASMR4Y_01893 CDS
T04949
Name
(GenBank) farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00900
Terpenoid backbone biosynthesis
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SPHFLASMR4Y_01893
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfla01006
]
SPHFLASMR4Y_01893
Enzymes [BR:
sfla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SPHFLASMR4Y_01893
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SPHFLASMR4Y_01893
Prenyltransferases [BR:
sfla01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SPHFLASMR4Y_01893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
ASK88639
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All DBs
Position
complement(1943337..1944284)
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AA seq
315 aa
AA seq
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MANRKLLPLLTRTEPVAANNNSDLLREMGRVATAIDRQFDMLLQVPDDARRSLYEAMRHA
AIGGGKRLRPLLVMATARLFNVDESCAIRAATGVEALHVYSLIHDDLPCMDDDDLRRGKP
TTHIAFGEAAAVLAGDALHALAFGLLADERTHHDPFVRAEMTACLAKAAGPAGMAGGQMM
DLVAEKSTFDLPTVTRLQQLKTGALIGACVEIGAILGRVAIEGRTSLRGYAHDLGLAFQI
ADDILDVEGDEDKAGKALHKDAEAGKETFLSLMGLERAREQAQMLVDQAKSHLNGYGEEA
NLLRAIAEYTITRDR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgcaagctactgccccttttgacgcggactgagccggtggcggccaataat
aattcggatctgttacgggaaatggggcgggttgctaccgctatcgaccggcagttcgat
atgcttttgcaggtgcctgacgatgcccgtcgcagcttgtacgaggccatgcgccatgcc
gcgatcggaggcgggaaacggctgcgtccgctgctggtaatggcgaccgcgcgattgttc
aacgtcgatgaaagttgcgcgatccgtgctgcgaccggggtcgaggcccttcacgtctat
tcgctgatccacgatgatctgccctgtatggatgatgatgatctgcgccggggcaagccg
accacccatattgcctttggcgaagccgccgcggttcttgccggcgatgccctgcacgcg
ctggccttcggtttgctggctgatgagcgcacccatcatgatcccttcgttcgggcagag
atgaccgcctgtctcgccaaagccgccggaccggctggcatggcgggcggccagatgatg
gatctggtggcggaaaagtcgactttcgatctgccgactgtgactcgcttgcagcaactg
aaaaccggggcgctgatcggtgcctgtgtggagatcggcgcgattctcggtcgggtggcc
attgaaggacggaccagcctgcgcggctatgcccatgatctgggtctcgccttccagatt
gccgacgacatcctggatgtcgagggtgacgaggacaaggccggcaaggcgctccacaaa
gacgcagaggccggcaaggaaacctttctcagcctgatgggactggagcgggccagagaa
caggcccagatgctggtggatcaggccaaatcgcatttgaacggctatggcgaggaagca
aacctgcttcgcgcaattgccgaatatacaatcaccagggaccgctag
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