Streptomyces flavusporus: ACKTSN_18950
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Entry
ACKTSN_18950 CDS
T11144
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sflu Streptomyces flavusporus
Pathway
sflu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACKTSN_18950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sflu03021
]
ACKTSN_18950
03400 DNA repair and recombination proteins [BR:
sflu03400
]
ACKTSN_18950
Enzymes [BR:
sflu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACKTSN_18950
Transcription machinery [BR:
sflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACKTSN_18950
DNA repair and recombination proteins [BR:
sflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACKTSN_18950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XLX07637
LinkDB
All DBs
Position
complement(4027636..4028658)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
acgctcctgtcgtcgatccccggtgcggctgtcaccagcatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtggtttccagcgagcacgatgagcccgtcgtcatgtacctgcgcaagcag
gggcccgggctcgtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctcacggtc
gagcgtggccgtggttacgtctccgccgtgcagaacaagcaggtgggccaggagatcggt
cgtatcccggtcgactccatctactcgccggttctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcgtgacgcgatggcttctgccggtaagacgctggtcgagctgttcggg
ctcgcccgtgagctcaacatcgacgccgagggcatcgacatgggtccgtccccgacggac
gctgcgcttgctgccgatctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctggttgcgcgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggcgggtatgggtcttgcgctcaaggacagcccgcccggattcgacccgaccgccgct
gcggacgcgttcggcgcggacgacgacgcggacgccgggttcgtcgagaccgagcagtac
tga
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