Scleropages formosus (Asian bonytongue): 108918032
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Entry
108918032 CDS
T04919
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108918032 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108918032 (ercc6)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108918032 (ercc6)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108918032 (ercc6)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108918032 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108918032
NCBI-ProteinID:
XP_018580405
LinkDB
All DBs
Position
8:9554615..9573442
Genome browser
AA seq
1449 aa
AA seq
DB search
MRSPLSSLCASCLSCACRTFPVFACSNIKMPADGSEDQGLPALSSLVSSACFSGTEVGTE
RGSECEGTNRDESAILEPGSLVELPRRPQSLVHIDRQKIQTVSRVAQATELQDLGVDVYD
QDVLERGVLQQVDHAIQQASQAAAKTEAKKEYESVLDDLRSCTGALKHIDKIIDQLAPYA
ATSKDINRKIESVKRQKENKEKQLKKIRAKQKRLQAILGGDVQKIEAELLEDYDEEPGPS
TLGSMLMPAQDTEWEELIRTGQMTPFGTRIPQQPKHKEPRKIMLSENSGFDKYLADQAMM
AISRKKRVARRKSRAHANSVSVGKSKPKENNDFTSKDRKLQKRMRKLQRNALRVCPKAKP
VKELIASKKKVRGDSDSEGSEYIPSDELMDPDQPDQDDDFWVDEGEEYELKPYSKKAERK
SRRTKKATGSEEDYPSSSEEEDSGKKGAVKKCKDDGDIECYKQRIRRWKRQRLLEKVQKQ
EAREDDSEESDAEFDEGFKMPGFLWKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKT
IQFIAFLAGLSYSKLRTRGSNYRYEGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHE
TGSFTSRKEKLIPEIVESHGILITSYSYVRIMQDYIQKYDWHYIILDEGHKIRNPHAGVT
VACKMFRTPHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPTFMEQFSVPITMGGYANA
SPVQVQTAYKCACVLRDTINPYLLRRMKADVKTNLSLPDKNEQVLFCRLTEEQRKIYQNF
IDSKEVYQILNREMQVFSGLIALRKICNHPDLFSGGPRILRGVPEDQLTKEEHFGYWRRS
GKLIVVESLLRLWYKQGHRVLLFTQSRQMLEILEVFVRENGYTYLKMDGTTTIASRQPLI
AQYNEDESIFLFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVT
VYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSNPDSSQGTET
SAIFAGTGSDVQVPKKPKKVKLPSSPEKRHSQLNGITKLKDLSQDPLQRNSLHLNLTSSS
LTDKINSPQSTNGFTGPNDTDGCNQDDGSPTNGASKCTLYCEVKARPADGIGHSPQKQKE
KTKHCDPEDTSVPLKHKHHRDARFEGHRISHLVKKRRYKRVGGDEKDKEDQNKSEDYVLA
KLFKKSGIHSVMKHDSIMEASNPDYVLVEAEADRVAKDALRVLKLSRQHCRIPFSRVPTE
NDCGTPLGTPGTFKRRFGQKKNPVLAETSTSAAHGSDKCKDAAIIKKSALKKPTSSNHFS
GEGLDEDSGSAALSSSVLLAKMKARNHLSLSQSLEEEDQDEGSSLQSTGGTDFPRASTEH
DELLVDLRNFVAFQAQVNGQASTEEILQHFGPRLSASQTAVFRELIRNLCDFHRTPGQEG
MWRLKADFH
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtccactcagtagtttgtgtgcctcatgtctgtcttgtgcctgtcgtacgttt
cctgtatttgcttgcagtaatataaagatgccagcagatggtagtgaggaccaaggactc
ccagcgctgtccagccttgtcagctctgcctgcttttctgggacagaggtggggacagag
cgtggatctgagtgtgaaggcaccaacagggatgagtctgccatcttggaaccgggatcc
ttggtggagcttcctcggaggccccagtccttggttcatattgatcgtcaaaagatccag
acagtgtcgcgcgtggcccaggctactgagctccaggaccttggcgttgatgtatatgat
caggatgtgctggagcggggcgtgcttcagcaggtggaccatgccatacagcaggccagc
caggctgcagctaagactgaggccaagaaggagtatgagtctgtgctggatgaccttcgt
tcctgcacaggtgcattaaagcacattgataaaattatagatcaacttgctccatatgct
gctaccagcaaagacatcaacaggaaaattgaatctgtcaaaaggcagaaagagaacaag
gaaaagcagttaaaaaagataagagccaaacagaaacgactacaagccattcttggagga
gatgttcagaagatcgaagctgaattgctggaggattatgatgaagagcctggcccatcc
accctgggcagcatgctcatgccggcacaggatactgagtgggaggagttaatccgtaca
ggtcagatgacgcccttcggcacccgcatcccccaacagccaaagcacaaggaaccccgt
aagattatgctcagtgagaattcaggctttgataagtacctggctgaccaagccatgatg
gccatcagcaggaagaaacgggtggccaggagaaagtccagggctcacgccaacagtgtt
tctgtgggtaaaagcaaaccaaaggagaacaacgatttcaccagtaaggacaggaagctc
cagaaacgtatgcgaaagctgcagaggaatgcgctcagagtttgccccaaagctaaaccc
gtcaaggaactgatcgcttccaagaagaaggtgcggggagactctgacagcgaaggctca
gagtacatccccagtgatgagctcatggaccctgatcagccagatcaagatgatgacttc
tgggtggatgaaggtgaagaatatgaactgaagccttacagcaagaaggcggaacggaaa
tccagaaggacgaagaaggctactggaagtgaggaggactaccctagcagctcagaggaa
gaggacagcgggaagaaaggtgccgtgaagaaatgtaaagatgacggggacatagagtgt
tacaaacagagaataaggaggtggaagcggcagaggctactggaaaaggtgcagaagcaa
gaagcacgagaggacgactcagaagagagcgacgcagagttcgatgaaggtttcaaaatg
cctggtttcctctggaaaaagctcttcaagtaccagcaaacgggcgtcaggtggctatgg
gagctgcattgccagcaagcaggaggaattctgggagatgagatgggcctgggcaagaca
atccagttcatcgccttcctggcagggctgagctacagcaagctgaggacgcgaggctca
aattacaggtacgaaggcctgggccccacagtcatcgtgtgcccagccacagtcatgcac
cagtgggtcaaggagttccacacctggtggccgccttttcgtgtggctgtgctccatgaa
acgggctcctttaccagcaggaaggagaaactgattccggagattgtggagagtcatggt
atcctcatcacctcctactcgtatgtgcgtatcatgcaggactacatccagaagtacgac
tggcattacattattttggatgagggacacaagattcgcaaccctcatgctggagttaca
gtggcctgtaaaatgttccgcacgccccatcgcatcatcctctccggctccccgatgcag
aacaacctgaaagagctctggtctctgtttgactttgtcttccctggcaagttgggcacg
ctgcccaccttcatggaacagttctctgtgcccatcacgatgggaggctacgccaatgcg
tcacctgttcaggtccagacagcctacaagtgtgcttgtgttttacgagacaccattaac
ccctacctgcttcggaggatgaaagctgatgtgaaaaccaacctttctctaccagacaag
aatgagcaggttctgttttgccgattgactgaggagcagcgaaaaatctatcagaacttt
atcgactccaaagaagtatatcagatcctgaatagggaaatgcaggtgttctctgggctg
attgcgttgaggaagatttgcaaccacccagatctgttctctggagggccccggatcttg
cggggtgttcctgaagaccagttgactaaagaggagcactttggttactggcgtcgttcc
ggcaagctgatcgtggtggagtcacttctccgactgtggtacaagcagggccacagagtg
ctactcttcacccagtcaagacagatgctggaaatcctggaggtatttgtgagggaaaat
ggatacacatatctgaaaatggacggcaccaccaccatagcctccagacaaccgcttatt
gcacagtacaatgaggacgagtcaatcttcctcttcctgctgactactagagttggtggt
cttggtgttaatttgactggcgcaaaccgcgtcattatctatgacccagactggaacccc
agcacagacactcaggctcgtgagcgtgcatggagaattggccagaaacagcaggtgacc
gtgtacaggctgctcactgctgggacaattgaagagaagatttaccacagacaaatcttc
aagcagttcctcacaaatcgagtacttaaagaccccaaacaacgtcgatttttcaagtcc
aatgacatttacgagctcttcacgctgagcaatcctgacagctcccagggaactgaaacc
agtgcaatatttgcaggtactggttctgatgtgcaagtgcccaagaagccaaaaaaagtg
aaattgccaagttctcctgaaaaaagacacagccagctgaatggaatcacaaaactaaaa
gacctttcccaagatccactacaaagaaactctctccatttaaatttgacatcctcatca
ctaactgataaaataaacagtccacagtccacaaatgggttcactggacctaatgacacc
gatggctgtaaccaagatgacgggagtcccacaaacggggcttctaaatgcacattatac
tgcgaggtgaaggcaaggccagctgatggaatagggcacagtcctcagaaacagaaagaa
aagactaaacattgtgatccagaagatacttcagtgccattgaaacacaagcaccatagg
gatgcccgatttgaagggcatcgcatctcgcacctggtaaagaagaggagatacaagagg
gttggtggtgatgagaaagacaaagaagaccagaataaaagtgaagactatgtccttgcc
aaactgtttaagaagtcaggtattcatagtgtgatgaagcatgattccatcatggaggca
tccaacccagactatgtgcttgttgaggcagaggctgaccgcgtagctaaagatgccctg
cgggtcctgaagttgtctcgccagcactgcaggatccccttctcacgagtgcccactgaa
aacgactgtgggacaccactgggaacccctggaactttcaagagaaggtttggtcaaaag
aagaacccagtgttagcagagactagcacttctgctgcacatggatcggacaaatgcaag
gatgctgctataataaagaagtctgctcttaaaaaaccaacatcctccaaccacttcagt
ggagaagggttggatgaagactctggttctgctgccctctcctcttctgttctgttagcc
aagatgaaggccaggaaccacctgagcttatcccagagcctggaggaggaagaccaagat
gaaggcagcagcctgcaatcgacagggggcacagatttcccccgtgcctctacagaacac
gatgagctactggtggaccttcggaactttgtggccttccaggcccaggtgaatgggcag
gctagcactgaggagatcctacaacactttggccccaggctatctgcctctcagacagca
gtcttcagagagcttatcaggaacctgtgtgacttccaccgtaccccaggccaagagggg
atgtggaggctcaaagctgacttccactaa
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