KEGG   Scleropages formosus (Asian bonytongue): 108918765
Entry
108918765         CDS       T04919                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04510  Focal adhesion
sfm04512  ECM-receptor interaction
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108918765
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108918765
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108918765
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sfm00535]
    108918765
Proteoglycans [BR:sfm00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108918765
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108918765
NCBI-ProteinID: XP_018581802
LinkDB
Position
21:complement(12332039..12355918)
AA seq 684 aa
MTGPAAALGPLLVLLLHLVLGCAAQRLPPGPRGPPGPPGVPGIDGIDGERGPSGPDGAPG
LDGDDGKPGSAGLPGEPGADGLTGPIGEPGPRGPRGQKGEPGKAGLRGPPGVGPDGPPGP
VGPAGLPGEVGKVGLTGAMGLRGPPGPPGPPGPRGAAGVHGAGGVLCLNACPPGLSGHPG
LPGMKGHKGVKGEPGEPGKQGHKGAEGDQGDPGEVGAQGPPGPQGLRGIKGIMGSKGEMG
PREQDGEPGPRGVQGAAGDPGQRGVAGETGLKGARGLQGPRGITGLPGANGESGLPGVDG
REGIPGMPATKGLPGKTGAPGDAGPQGLPGLPGAPGPKGISGGKGNTGEPGLTGSMGSSG
KTGERGEKGDVGPVGPRGGPGARGERGPAGPPGKPGPRGAIGDLGLPGLPGPPGLPGAKG
DRGAVGKTGPKGEQGPPGAEGTPGDKGDQGERGEHGPKGATGPPGEPGSRGPEGVRGLAG
VEGPSGAPGPRGMQGDRGVPGFPGPQGPAGKEPSDQQIRQVCMRVMQEQLAQLAASLRRP
ESGLAGLPGRPGPPGPPGNPGDSGFPGQAGARGLPGLKGPPGPIGLKGPKGEVGDRGDRG
PTVRGPKGMPGAPGLPGEPGRPGYGTDGRDGERGPPGIPGIPGIPGPPGPPGLNGYCDPS
ACTLQAAASSQSLKDSNMKGPGGP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgactggacccgctgctgccctcgggcccctgcttgtgctcctgcttcacctcgtactc
ggctgtgctgctcagcgactcccaccaggaccccgcggaccccccggcccccctggtgtc
cctggaatcgatggcatcgacggggaaagaggtcccagcggcccggacggtgctcctggc
cttgatggagatgatggaaaaccgggctctgcaggactgcccggcgaacccggagccgac
ggtttgactgggcccattggagagcctggtccaaggggtccacggggacaaaaaggagaa
ccggggaaggctgggcttcgtggaccaccaggtgttggacctgatggacctcctggacct
gtgggaccagcaggactaccaggcgaagttggtaaagttggactcacaggagccatggga
ctgagaggccctccaggaccccctggacccccagggcctagaggagctgctggggtccat
ggtgcgggtggagtgctgtgtctcaacgcctgcccccctggcctctcaggccacccaggt
cttccaggtatgaagggccacaagggtgtaaaaggagaacctggtgagccaggcaaacaa
gggcacaagggtgcagagggagaccaaggagaccctggagaagtcggagcacaaggccca
ccaggacctcaagggctcagagggatcaaagggatcatgggttccaaaggagaaatgggg
cctcgtgagcaggatggagagccaggtcctcggggtgtccaaggggcagctggagaccca
ggccagaggggtgtggccggagagacgggtctcaaaggtgctcgggggcttcaagggcca
agaggaatcactggtctcccaggggccaatggcgagagtggactccctggagtggacggg
cgtgaagggattcctgggatgccggccactaagggacttccagggaaaacaggagctcca
ggagacgcgggtcctcagggacttcctggtttaccaggggctccaggtcctaaaggcatc
agtggtgggaagggcaacacaggagagccgggtcttactgggtccatgggctcttctggt
aaaacaggcgagcgcggtgaaaagggagatgtgggacccgttggaccaagaggtggacca
ggtgcaagaggagagcgtggtccagctggtcccccaggaaagccaggtccccgtggagct
attggggacctcggtctgccgggactcccagggcctccaggtctgccaggagcaaaagga
gacagaggggctgttggaaaaactggtccaaaaggggaacaaggacctcctggagctgaa
gggacgcctggtgacaaaggggaccaaggtgagcgaggagagcacggaccaaaaggagca
actggaccccctggggagcctggaagcagaggcccagaaggggtacgtgggcttgctggg
gtcgagggaccatccggcgcaccaggaccacgtggcatgcagggagacaggggtgtcccc
ggatttccaggtccacagggacctgcgggtaaagagccaagtgatcagcagatcagacaa
gtttgcatgagggtcatgcaagagcagttggcccagttggctgccagtcttagaagacct
gagtctggacttgctgggctacctggcagacctggacctcctggaccccctggtaaccct
ggagacagcggcttccctgggcaggcaggtgccagagggctgccaggcctcaaaggtccg
ccaggtcccatagggctgaaaggaccaaaaggtgaagtgggagacaggggagaccgaggt
cccacggtacgaggacccaaaggaatgccgggggcccctggtttacctggggagcctggg
agacctggctatggcacagatgggcgggacggtgagagggggcctcctggtatccctgga
atacctggaatcccagggcctcctggtccccctggcctcaatggctactgcgacccttcg
gcttgtactttgcaggcagcagcttcatctcagtctctgaaggactcaaacatgaaaggg
cctggaggaccatga

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