Scleropages formosus (Asian bonytongue): 108926218
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Entry
108926218 CDS
T04919
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
108926218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108926218
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108926218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
108926218
NCBI-ProteinID:
XP_029109376
LinkDB
All DBs
Position
7:complement(20272501..20334328)
Genome browser
AA seq
1540 aa
AA seq
DB search
MARATGQRMLSNPDLIIAPKTEVRTTVFPSRMNPLELTTITASAEEMYKPIVFTREIFCK
YSGYIPTPQMMQFNQGGVLSWLSNGLASALPQPIGTAQLAQASTNGKTEAKQPAPQETTA
DTRQGGGVIGWIVQELVKVVPQPEEKSKEADKSKEPEPPRAPETVTEVVHDASTIPDAEP
LPHIPVVEVVSEKEPSEVDNNNQPVSPRVIDWLKQSFEKVIPQPPEIQAPLNTEESLKKE
ASAASPAPSPAAAPAPTPSQAPAPAETMKESLFRDPNEHEDEDEDGRTDASPSVLCPSSG
VVGWIFQELNRMIPQPVVKPKENTPEGVSVAQNTCIAQDPGQMVLEDVDSDWENEKEELP
PSRDPPRPMSPPLSFLPQVMAMHQEDAETQTDRWTPLVERIKKEAEESVMATLEERLRQE
RLESARMAEEVARAAAETAVRQLAEQQGTGREPVAQDEEEEKEGQEEADGGEQLPNIQED
ENEEDPELLEIREESEEETADNKTEPTSPEEARRTPSPVEDSRPSPVQELLNEPEAESTR
SPSPQAKAPELEADETSAPRDPETNIIKGASPPPEEAEPLRAPSPSAEEPEPVRRASPEV
VKEESSTVTEQPGPSEDPCVSPASAQEEEKKAEGCEARCLSVKSCLMRVPYVPECLDRFR
QLLRENNISVPKLPPMPELPPQVVQFNQRLQPHLAQFNQHLQPCLDQFSQKLQPHLTQLK
QQLQPPLAQLKPQLPQQVTQLPQKLVELPQRVAQLPHLTQSSRLSIHPAVNVEDVDSEGE
LGGGPSNIPQILAPHTPKFKTLTVPGVNVATRRKKLYTEEENDEEEPGTAIKAWPSQTSL
LSVDDGTKDRPGSALSQTSMVVNDRLQELVKLFKERTERVKEKLIDPDSSDDESPSTSPS
KKSAAPPPPPEEKKEEVPGPSDKEVEECYRDVLCCKVKLPPWVRAVLNYRFPDSIDPFTN
LVYVLWLFFVTMAWNWNVWLIPVRWAFPYQRPDNIHLWLMADYLCDTIYILDILVFQPRL
QFVRGGDIVCDKKEMRGNYMKSLRFKMDVISLIPLELLYIKTGVNSLLRFPRLLKFMAFF
EFNDRLEAILSKAYIYRVIRTTTYLLYSLHCNACLFYWGSTYQGLGSTSWVYDGVGNSYI
RCYYFAVKTLITIGGLPSPTTLFEITFQLVNYFVGVFAFSIMIGQMRDVVGAATAGQTYY
RACVDNTIKYMNSYRIPRDVQNRVKTWYDYTWQSQGMLDEQGLLVQLPDKMRLDIAVDVN
YAIVSKVALFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGP
DGKTVFATLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLAEILVHYPESQ
KLLRKKAKKMLTKDKKPAGDKTEAKETPQVIPPRPETPKLFKAALEVTEKSGIKGTFSKL
KEKSVRSSSTLEPSPTTSSPIPPPSPVHRRSPVPRKVVEEDNDDEMVSETTDSSMLIRMA
PRPHGEEILSVEVVPGDEEEEEEEGGKSVEEEKEEATPKE
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagctaccggacagaggatgttgagcaatcctgacctcatcattgctccaaaa
acggaagtgcgtaccactgtcttccccagcaggatgaatcccctggagctgaccacaatc
actgcctcagcggaggaaatgtacaagcccattgttttcacccgggagattttctgcaaa
tacagtggctatattccgactccgcagatgatgcaattcaaccagggtggggtgctatcc
tggctctccaatggactggctagcgcattgccccaacccattggaactgcccaacttgct
caggccagcaccaatggcaaaacagaagccaagcagccagcgccccaggagaccacagct
gacaccaggcaagggggcggagtcatcggctggatcgtccaagaactggtgaaggtcgtg
ccgcagccggaggagaagtccaaagaagcggacaagtctaaagagcctgagccgccacgt
gctccggagacggtcacggaagtggttcacgatgccagcactattccagatgcagagccg
ctcccgcacatacccgtggtggaagtggtgtctgagaaggagccctctgaggtggacaat
aacaaccagcccgtttcccccagggtgatcgactggctaaagcaaagctttgagaaggtc
atcccccagccgccagagatccaggctcctctgaacaccgaggagtctctgaaaaaggag
gcctctgctgcttctccagctccttctcccgctgcggctcctgctcccaccccttcacaa
gccccagctccagcagaaacaatgaaagagagtttgtttcgggaccccaatgagcacgag
gatgaggatgaggatggccgaaccgatgcgtctccctctgtcctctgcccctccagcggc
gtggttggctggatcttccaggagctgaaccgcatgataccgcagcctgttgtgaagcct
aaggagaatacgccggagggagtcagtgtcgcacaaaacacttgtattgctcaggatcct
gggcagatggtactggaggacgtggactcggactgggagaacgagaaagaggagttacca
ccttcccgggaccctccacggcccatgagccctcctctgagcttcctcccccaggtgatg
gccatgcatcaggaggacgctgagactcagacagaccgctggacaccccttgtggagcgc
atcaagaaggaggctgaggagtctgtcatggcaacactggaggagaggctcaggcaggag
aggctggaatctgcacgcatggcagaggaggtggcccgggcggcagcagagacggccgtg
cggcagctagcggagcaacaggggaccgggcgagaaccggtggcccaggatgaggaggag
gagaaagaggggcaggaggaggctgatggtggagagcaattgcccaatatccaggaggac
gagaacgaagaagatccagagttactggagatccgtgaggagagtgaggaggagacggca
gataataagacagagccgacatctccagaagaagccagaaggaccccgtcgcccgtggaa
gatagccggccatcccctgttcaggagctgctgaatgaacctgaggcagaaagcaccagg
agcccatctcctcaggccaaggcaccagagctagaagcagatgagacgtctgctccacgg
gatccggaaacaaacatcataaagggagcatctcctccacctgaggaagcagaaccgtta
agggcaccatcaccttcagctgaagaaccagaaccagtaaggagagcatccccagaggtt
gtaaaggaagagtcctccactgtgactgagcaaccggggcccagcgaggacccatgtgtc
tctccagcctctgcacaggaggaagaaaaaaaggccgagggatgtgaagcccgctgcctc
tcagtaaagagctgtctaatgcgagtcccctatgtgcctgaatgcctcgaccgcttccgt
cagctgctgcgagagaacaacatctctgtgccaaagctgcccccgatgcccgagcttcct
ccgcaggtggtccagtttaaccagaggctgcagccgcatctggcccagttcaaccagcat
ctgcagccctgcctggaccagttcagtcagaagctgcagccgcacctgacacagctgaag
cagcagttgcaacccccgttggctcagctgaaaccacagctgccccaacaggtcacccag
ctgccccagaagctcgtggagctgccccagcgggtcgcacagcttccccatctcacccag
agctcgaggttgagcatccaccctgccgtcaatgtggaggacgtggactcagagggagag
ctgggagggggtcccagcaacatacctcaaattctcgcccctcacacacctaaattcaag
actcttactgtccccggcgtgaacgtggcaactcggagaaagaagctttatactgaagaa
gaaaatgatgaagaagagccagggacagccatcaaggcttggcccagccagaccagcctc
ctcagtgttgatgatggaacgaaagaccgcccaggctcagccctcagccagacgagcatg
gtggtcaacgatcggctccaggagctggtcaagctcttcaaggagaggacagagcgtgtc
aaggagaagctcatcgatccagactcctccgacgacgagagcccctccacctccccatcg
aaaaagtctgcggcacctcccccgccacctgaggagaagaaggaggaagtccccggacca
tcggacaaggaggtggaggagtgctaccgcgatgtgctgtgctgcaaggtgaaactgcca
ccgtgggtgagggcggtgctaaactaccgcttcccggacagcatcgaccccttcaccaac
ctggtttatgttctctggctcttcttcgtcaccatggcctggaactggaatgtgtggctc
atcccggtgcgatgggccttcccttaccagcgtcctgacaacatacacctgtggctgatg
gccgactacctgtgcgacactatctacatcctggacatcctggttttccagcctcgcctg
cagttcgtccgcggcggagacattgtgtgtgacaaaaaagaaatgagaggaaactacatg
aaaagccttcgtttcaagatggatgtcatctccctcattcccctagagctgctgtacata
aagactggagtcaattctctccttcgcttccctcggctattgaagttcatggcgttcttt
gagttcaatgaccgcctggaagccattctgagcaaagcatacatctacagagtcatccga
accaccacgtacctgttgtactctctgcactgtaacgcctgccttttctactggggctcc
acctaccaagggcttgggtccaccagctgggtgtatgatggtgtcggaaacagctacatc
cgctgttactactttgctgtcaagaccctgatcaccatcgggggccttcctagccccacc
acgttgtttgagatcaccttccagctggtcaactactttgtgggagtgtttgctttctcc
atcatgattggacagatgagggatgtggtgggtgcagccacagcaggacagacctactac
agggcctgcgtggacaacaccatcaagtacatgaactcctaccgcatacctcgtgatgtg
cagaaccgagtcaagacctggtacgactacacttggcagtctcagggcatgctggacgaa
caggggttgctggtgcagctcccggacaaaatgaggcttgacatcgcggtagatgtcaat
tatgccattgtcagcaaagtggctttattccaggggtgtgaccggcagatgatctttgat
atgttgaagagactcaggtctgtggtttacctgccgggcgactacgtttgcaaaaaggga
gagatcgggagagagatgtacattatcaaagctggggaagtgcaggtggtgggcggaccg
gacgggaagaccgtttttgcaacactgagggcggggtctgtgtttggagaaatcagtttg
ttggcagttggaggggggaaccggcgaacggccaacgtggtggctcacggtttcgccaac
ctcttcattctggacaagaaggacctggctgagattctggtccattatccagagtcccag
aagctcctgcgcaagaaggccaagaaaatgttgaccaaggacaaaaagccagcaggcgac
aagacagaggcaaaggagacacctcaggtcatccctccacgacctgagacccccaaactg
ttcaaagcagcgttggaggtgacggagaagtctggcattaaaggcaccttctccaagctg
aaggagaagtcagtcaggtcaagctcgaccttggagccgtcccccacaacctcgtcaccc
atcccccctccatcccccgtccaccgccgctccccagttccacgcaaggtggtggaggag
gacaatgacgacgaaatggtgtctgagaccaccgatagctctatgctgatccgcatggct
ccacgtccgcatggggaggagatactttctgtagaggttgtccctggggatgaggaagag
gaagaggaagagggagggaagtctgtagaggaagagaaggaggaagcaacacccaaggag
taa
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