Scleropages formosus (Asian bonytongue): 108927401
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Entry
108927401 CDS
T04919
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108927401 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108927401 (trip13)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
108927401 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_25
AAA_24
AAA_18
Viral_helicase1
TIP49
NPHP3_N
Cytidylate_kin
AAA_5
AAA_28
NACHT
AAA_33
ATPase_2
TsaE
RNA_helicase
ATPase
RuvB_N
ABC_tran
bpMoxR
AAA_30
IstB_IS21
AAA_11
AAA_7
AAA_17
SLFN-g3_helicase
DUF815
AAA_19
Rad17
AAA_3
Mg_chelatase
NB-ARC
nSTAND1
PduV-EutP
DUF6393
Sigma54_activat
PhoH
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
108927401
NCBI-ProteinID:
XP_018596188
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All DBs
Position
18:11461479..11467059
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AA seq
428 aa
AA seq
DB search
MQPNMEVVEDVKLCPNNSDAVTVHVEVLVKAHSTAKREDVKVHVLALLNRHRMVFGDYKW
VEFDEDFLAKHVESVAIVDTERQPLDLQSCCLSIHIFTLYDDGVSTLNLEEDEDLSAANH
WLLPAAEFHGIWESLVYENGVKKQLLDYVSTTIFFSDKNVDSNLISWNRVVLLHGPPGTG
KTSLCKALAQKLSIRLSNRYAYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKE
ALVFVLIDEVESLTAARNAAKAGTEPSDAIRVVNAVLTQLDQIKRHPNVVILTTSNVTEK
IDLAFVDRADIKQYIGPPSAEAIFNIYLSCLGELMKCQIIYPRHQLLTMLELETMGFQEN
NVSELSLILRDIAAKSKGLSGRALRKLPFLAHALFVKTPTVTLERFLEAMDQAVNKQIEE
KANLVNSV
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaatatggaggttgttgaagatgtaaaactatgccctaataatagcgatgca
gtgactgtgcacgtggaggtcctggtgaaggctcacagcactgccaaaagagaggacgtg
aaggttcatgtgctagcattgctcaaccgccaccggatggtgtttggggactataagtgg
gttgagttcgatgaggacttcctggcaaaacatgttgagtctgtagcaatcgtggacact
gaacgacagccattagatctacagagttgctgtctgtccattcacatctttacactttat
gatgatggagtgagcacactgaacctggaggaggatgaggacctgtcagcagcaaaccac
tggctcttacctgcagctgaatttcatggcatttgggaaagtctggtgtatgagaatgga
gtcaagaaacagctcctagattatgtctcaacaacaattttcttctctgacaaaaatgtg
gacagcaacctgatttcatggaaccgtgttgtattgcttcatggaccccctggaactgga
aaaacctctctctgtaaagctctggctcaaaaactctccattcgattgtcaaacaggtat
gcttatggccaatttgtagagattaatagccatagtttgttctccaaatggttttctgag
agcggtaaacttgttaccaagatgttccagaagatccagcagttgatagatgacaaagaa
gctcttgtgtttgttctgattgatgaggtggagagccttacggcggctcgtaatgcagcc
aaagctggaacagagccctcagatgctatccgtgtggtcaacgctgtgctcacacaactg
gaccagatcaaaagacatccaaatgtagtgatcctcaccacatccaatgtgactgagaag
attgacctggccttcgttgaccgggctgacattaagcaatacatcggacctccttcagct
gaggctattttcaacatttatctttcttgtctcggagagctcatgaagtgccagatcatt
taccctcggcatcagctcctgaccatgctggagctggagaccatgggttttcaggagaac
aatgtatcggagcttagcctcattctcagggatattgcagcaaagagcaaaggacttagc
gggagggcactgaggaaactgccatttttggcccatgccctctttgtcaagaccccaaca
gtcaccctcgagaggttcctcgaggctatggaccaagcagtgaacaaacagattgaagag
aaggctaacctggttaactctgtgtga
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