Scleropages formosus (Asian bonytongue): 108927499
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Entry
108927499 CDS
T04919
Symbol
cacna1a
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108927499 (cacna1a)
04020 Calcium signaling pathway
108927499 (cacna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108927499 (cacna1a)
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108927499 (cacna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Chordopox_G3
Motif
Other DBs
NCBI-GeneID:
108927499
NCBI-ProteinID:
XP_018596351
LinkDB
All DBs
Position
20:complement(25391723..25511860)
Genome browser
AA seq
2423 aa
AA seq
DB search
MARFGDEVPARYGGAPSQSGPGRGGVGGGSSRQGGPPGAQRMYKQSMAQRARTMALYNPI
PVRQNCFTVNRSLFLFSEDNVVRKYAKKITEWPPFEWMILTTIIANCIVLALEQHLPMED
KTPMSERLDDTEPYFIGIFCFESGIKILALGFVFHKGSYLRNGWNVMDFVVVLTGILSSV
GSELDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGL
EFYMGKFHFTCFDIITNEIQDELPCGKSESSRMCSNGTECRGYWLGPNYGITQFDNILFA
VLTVFQCITMEGWTDLLYFSNDSLGSAWNWMYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVENRREFLKLRRQQQIERELNGYLEWICKAEEVILAEEVNDTGDRMPYDGSRRRPTIK
KSKTDLLNPEEGEDHLGDMAVGSPFARASIKSGKEGSSFSKKERRLRFFIRHMVKTQAFY
WTVLSLVGLNTLCVAIVHYKQPELLSDFLFYAEFIFLGLFISEMLIKIYGLGTRPYFHSS
FNCFDCAVIVGSIFEVVWAMIKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNS
MKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDTGTPPTNFDTFPAAIMTVFQILTGEDW
NVVMYDGIQSQGGVNKGMIFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEE
EQATSQKIALQKAKEVAEVSPLSAANLSIAAKEQQKNQRASQSVWEQRTSEIRRQNLMTS
REALYNELDPDDHWKVAYSRHIRPDIKTHLDRPLVVDPQENRNNNTNKTRPSDPALQEQR
IRQQRAEEFLPKQARHHDWGVSGGGGGGGGGGGGSSLARCYERPDCDDQQRRRHSHSHSQ
QSLTHADSMEERDRASHHRQTHRHTSGPTREGHSVSPCGERGPLSEHRHPRQHWRPPEDE
EGGGRSRGNRHRARGGGVGNKSKGPDGEEDCDHVDGVERRQRRHRHGSQSIYDNEGRRDR
ERVRQHRIRKEGQGNGPYLSTTRPIQQGPPQQDSQRSEDMDNVKNSKLATQSPDSHSLVG
PDPQNSSPLPSPAKANNNSNVAGEQKGPLSIPKPLGGNPGRAPDSSFVLIEPGRNTICKP
EHTAVDIPPVYPSSNAILQVNKNANTEPPPKKDEEKKEEEEETDKGGDDDGPKPMPPYSS
MFILSTTNPFRRMCHYIVTLRYFEMCILSVIAMSSIALAAEDPIQSDSPRNNVLRYFDYV
FTGVFTFEMLIKMVVLGLFLHQGAYFRDLWNILDFIVVSGALVAFAFTSSTRGSSKGKDI
STIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLF
KGRFFYCTDESKEFDHDCRGEYLVYDGDNEVKAQRREWKRYDFHYDNVLWALLTLFTVST
GEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQG
DKMMEDYSLEKNERACIDFAINAKPLTRHMPQNKQSFQYRMWQFVVSPPFEYTIMAMIAL
NTVVLMMKYDGSSTAYNNVLKNLNIVFTSLFSMECVLKIIAFGVLNYFKDAWNIFDFVTV
LGSITDIIVTELVNLTNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVC
LLIAMLFFIYAIIGMQLFGNLAIDDNRDNAINTHNNFRTFVMALMLLFRSATGEAWHEIM
LACLGEKDCDPRSGNKESECGSEFAYVYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSS
ILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMD
LPVADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKTLDLL
VTPHKATDLTVGKIYAAMMIMEYYRQSKAKKLQALREEQNRTPLMFQRMEPPSPAQDGGQ
GVVRLPETHQEPIINLPPRGGVTESQPWVGSRSQVFQKADSWSPERTHIDDLHDNRHDSQ
TVEMRDMGRYDYSDSEHYLPMEGHVRATSMPRLSADNQTITDSSPMKRSASSLCQGRSGR
SMQLDDYSLERVIPEEGQRHGHRQRHGHERSHRTSERSLSRYTDADTGQGWLGTDLSTTT
QSGDLPPKDRDRERGRPKDRRHHHHHHHHHSSVDKDHYGTDRSEYGHRLHGRDRHWSRSP
SESRGCRTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPSTPRPHVTYSPVIHKGNNP
PPGSQQGRLASPTLRRFSPEPRHGSPRSARHGQPWAPPVDSLDSDGYIYSQDYEYHCHEP
PAYDQGPLQGNPHPHPRSPRTSRHVRPPQAQPPPRRLPNGYHSTSPSPHRHGPHLGALRP
PHQRGPRKGMHEPYSETDEDDWC
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggagacgaggtgccggcccggtacgggggagcgccgagccaaagcggc
cccggccgcggcggtgtcggcggcggcagcagtaggcagggtggtccgcccggagcccag
aggatgtacaagcagtcgatggcccagcgagcccgaaccatggccctgtacaacccgata
ccggttcgacagaactgcttcacggtcaaccgctccctctttctgttcagcgaggacaac
gtggtgagaaaatacgcaaagaagatcaccgaatggcctccctttgaatggatgattctc
acaaccatcattgccaactgcatcgtcctggccctggagcagcaccttcccatggaagac
aaaactcccatgtctgagcgcctggatgacacggaaccctatttcatcggcatcttctgc
ttcgagtcaggcatcaaaatcctggcgctaggcttcgtcttccacaagggatcctacttg
cgcaatggctggaatgtcatggactttgtggtggtgctcaccggcatcctgtcgtctgtg
ggctcggaattggacctgaggacactacgtgccgtccgagtgttgagaccgctgaaactg
gtgtctggaattcccagcctccaggtggtgctgaagtccatcatgaaggcaatgatccca
ttgctacagatcggcctgctgctcttcttcgccatccttatgtttgccatcattggcctc
gagttctacatgggcaagttccacttcacctgcttcgacatcatcaccaacgagatccaa
gatgagcttccctgtgggaagtcggagtcgtcacggatgtgctcaaatgggacggagtgc
cggggttactggttaggccccaactatggcatcacacagtttgacaacatcctgttcgcc
gttctcacagtcttccagtgcatcaccatggagggatggactgacctgctctacttcagc
aacgactccttagggagtgcctggaattggatgtacttcatccctctcatcattataggg
tctttcttcatgctgaatctggttctgggtgtgctgtctggggagtttgcaaaagagagg
gagcgtgtggaaaataggagggagttcctcaagctcaggcgtcagcagcagattgagagg
gagctgaatggatatctggagtggatctgcaaagcagaagaggtgatcttggcagaggaa
gtgaatgacaccggtgatcggatgccctatgatggatcacgacgcagacccacaatcaag
aaaagcaaaacagacctactgaaccctgaggaaggagaggatcacctaggggacatggct
gtgggctcaccattcgctcgcgccagcatcaagagtggcaaagaaggctccagcttcagc
aaaaaagagcgacgcttgcgtttcttcatccgccacatggtgaagacacaggccttctat
tggactgtgcttagtctggtgggcctcaacacattgtgtgtggccatcgtgcactacaaa
caacctgagctgctctctgacttcctcttctatgcggagttcatcttcttgggactcttc
atatcagagatgctgataaagatctatggactggggacaaggccttattttcactcctcc
ttcaactgttttgattgcgctgttattgtaggcagtatatttgaagtggtctgggcaatg
atcaaaccaggtacctcattcgggatcagtgttttacgagctctcaggctgctgaggatc
ttcaaagtgaccaaatactgggcctccttgcggaatttggtggtgtccctcttgaactcc
atgaagtccatcattagcctgctgttcctgctcttcctcttcattgtagtctttgctcta
ctgggcatgcagctcttcgggggccagttcaatttcgatacaggaacccctcccaccaac
tttgatacctttcctgcagcaataatgactgtgtttcagatcttgacaggagaggactgg
aatgtggtgatgtatgatggaattcagtctcagggtggtgtcaataaaggcatgatcttc
tccattttctttattgttcttacactctttggaaattacactttattgaatgtgttcttg
gccattgctgtggataatctagctaatgcgcaggagctgaccaaggatgaagaagaggaa
gagcaggccacaagccaaaagatagctcttcagaaagccaaggaggtagcagaggtcagc
ccattgtcggcagccaacctctccatcgcagctaaagagcagcagaagaatcagagagcc
agccagtcagtgtgggaacagcgcaccagcgagattcggaggcagaacctcatgactagc
cgggaggcgctgtacaatgagctggatcccgatgaccactggaaggttgcctactcacgt
cacattcgcccagacattaagacccacctggaccggccattggtggtggacccacaggag
aaccgcaacaacaacaccaacaagacccggcccagtgatccagcattgcaggagcagagg
atcagacagcagcgggccgaggaattccttcccaaacaggcacgccatcacgactggggc
gtaagtggaggaggaggtggtggtggtggtggtggtggtggcagcagcttagcacgatgc
tatgaaaggccagattgtgatgaccagcagcggagacgtcacagccatagccacagtcaa
cagtcactcacccacgcagactccatggaggaacgcgatcgggcctcgcaccaccggcag
acccataggcacacctctggccccacaagagagggccacagtgtgtctccatgtggagag
agagggccactgtcagagcaccgtcacccccggcagcattggaggccacctgaggatgag
gaaggaggtgggcgcagccggggaaataggcaccgggcacgtggtggaggcgtgggaaac
aagagtaagggaccagatggagaagaggactgtgaccatgtggatggagtggagaggagg
cagagacggcatcgccatggctcccagtccatctatgacaatgaagggaggagggacagg
gagagagtgcggcagcaccgaatccgaaaagagggtcagggaaatggtccttacctgtcc
actacccggcctatccagcagggaccacctcagcaagacagtcagaggagtgaggacatg
gataatgttaaaaacagcaagcttgccacacagtccccagactcacatagtcttgttggt
cctgatccccaaaattcctccccactgccaagccccgccaaagctaacaacaacagcaat
gttgctggagagcaaaaaggcccactctccatcccaaagccactcggaggcaatccaggg
agagcccctgatagcagctttgtccttattgaaccaggcaggaataccatctgcaagcca
gagcacactgctgtggatattccccctgtttacccttccagcaatgcaattctgcaggta
aacaaaaatgccaacacagaaccaccacctaagaaggatgaggaaaagaaagaggaagag
gaggaaactgacaaaggcggtgatgatgacgggcccaagcccatgcctccatatagctca
atgttcattctgtccacaaccaatccgttccgcaggatgtgccactacatagtgacactg
cggtattttgagatgtgcatcctgtccgttattgccatgagcagcatcgccctagcagca
gaggaccccatacagtcagactcaccaaggaacaatgttttgcggtattttgactatgtc
ttcacaggggtgttcacatttgagatgttgataaagatggtggtcctagggttgttcctg
caccagggtgcctatttcagagatctttggaacatcctggactttatagtggttagtggt
gccctggtggcctttgccttcacgagcagcacccgggggagcagtaaggggaaggacatc
agcaccattaagtctctacgagtgctgagggtcctgcgtcctctgaagaccatcaagcgt
ctacccaagcttaaggctgtgtttgactgtgtggtgaactccctgaagaatgtactcaac
atcctgatcgtctacatgctcttcatgtttatctttgctgtggtagctgtgcagctcttc
aagggtcgcttcttctattgcacggatgagtccaaggagtttgatcatgattgcagggga
gaatacctggtttatgatggtgataatgaagtgaaggcacagaggcgggagtggaagagg
tacgatttccactacgacaacgtgctttgggccctgctcaccctcttcaccgtgtctact
ggagaggggtggccgcaggtactgaaacattcagtggatgcgacttatgagaatcagggc
ccaagcccggggtaccggatggaaatgtccatcttttatgtggtgtacttcgtggtcttc
cccttcttcttcgtcaacatcttcgtagccctcataatcatcacctttcaggaacagggt
gacaaaatgatggaagactatagcctggaaaagaatgagagagcctgcatagactttgcc
atcaatgccaagccactaacgcgccacatgccacagaacaagcagagtttccagtaccgc
atgtggcagtttgtagtttcaccaccatttgaatacaccatcatggccatgattgcactc
aacactgttgttctcatgatgaagtatgacggatcctccactgcctacaataatgttctg
aagaacctcaacattgtgttcacttcccttttttccatggagtgtgtactgaagatcatt
gcctttggagttctgaattatttcaaagatgcatggaatatttttgattttgtgactgtc
ctcggaagcatcactgacatcatcgtaacagagctagtgaatctgacaaatttcatcaac
ctaagtttcttgcggctcttcagagcagctcgtctcataaagctgctgcggcagggcgag
accatacgcatcctgctgtggacctttgtccagtcgttcaaggcactgccatatgtgtgt
ctgctcattgccatgctgttcttcatctatgccatcattggcatgcagctgtttgggaac
ctagcaattgatgataacagagataatgccatcaatacacacaacaacttcaggaccttt
gtaatggccctcatgctgctcttcaggagtgcaacaggagaggcatggcatgaaatcatg
cttgcctgtctgggggagaaagactgtgacccccgctctggcaacaaggaatctgaatgt
ggcagcgagtttgcctatgtttactttgtctccttcatcttcctctgctctttcttgatg
ctgaatttgtttgttgctgtcatcatggataattttgaatacctgactcgagactcctct
atcctgggacctcaccacttggacgagtatgtcaggatttgggccgagtatgacccagct
gcttgcgggcgcattcattataaggatatgtacagtttattgcgagtaatctccccccct
ctgggcttaggcaagaaatgtccccatagggtggcctgcaagagactgctacggatggat
ctgccagttgcagatgacaacacagttcatttcaactccaccctcatggccttaatccga
acagcgctggatatcaagatagccaagggaggtgcagacaaacaccagatggatgccgag
ttgcggaaggagatgatggcaatctggcccaatctctctcaaaagaccttggacctgctg
gtcaccccgcacaaggcaactgacctgacagtagggaagatctacgctgccatgatgatc
atggagtattaccggcagagtaaagccaaaaagcttcaggcactccgtgaggagcagaat
cgaacgccattaatgtttcagcgtatggagcccccttctccagcccaggacggtgggcag
ggagttgtccgcctcccagaaacacatcaggagcctattattaacttacctccaagagga
ggtgtgactgagagccagccatgggtgggatcacggtcccaggtgttccagaaagctgac
agctggagccccgagagaacacacattgatgacctgcatgacaaccgtcatgattcacag
acagtagagatgagagacatggggcggtacgattactcggacagtgagcactatctccca
atggaagggcacgtgagggccacttccatgcctcgactttcagcagacaaccaaactatc
acagacagcagtccaatgaagcgttccgcatcctcgctttgccaggggcgctctgggaga
agtatgcaactggatgattattctctagagagggtgataccagaggagggccaacggcat
ggccaccgccagcggcatggccatgagcgcagccaccgcacctccgagagatcactgagc
cgctacactgatgcagacacaggtcagggctggctcggcacggatctcagcaccaccacc
cagtcaggggatctgcctcccaaggacagggaccgggagcgtggacggcccaaggaccga
agacatcatcatcatcaccaccaccaccacagctctgtggacaaggatcattatgggacg
gacagaagcgagtatggtcaccggctccatggcagggatcggcactggtcacggtccccc
agcgagagccgagggtgtaggacgcacagacagggcagtagttcagtgagcgggagtccc
gtcccctcaacttccggcaccagcactccccgccgtggccgccggcagctcccccagacc
ccttccacaccccggccccatgtcacctactcccctgtgatccataagggcaacaacccc
cctccgggaagccagcagggccgactggcctccccaacccttcgccggttctcccctgag
cctcgccatggctccccacgctctgcccgccatggccagccctgggcaccccctgtagat
agcctggacagcgatggctacatctacagccaggactacgagtaccactgccacgaacca
cctgcctacgaccagggcccactacaaggcaatccccaccctcacccacgctcacccagg
acttcccgtcacgttcgccctccccaggcacagccaccccctcgtcgcctgcccaatggg
taccattccacttcaccgtccccccaccggcatggcccacatctgggggctcttaggccc
ccccatcagagaggacctagaaaaggcatgcatgaaccctacagcgagactgacgaggac
gactggtgctaa
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integrated database retrieval system
