KEGG   Scleropages formosus (Asian bonytongue): 108932804
Entry
108932804         CDS       T04919                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04510  Focal adhesion
sfm04512  ECM-receptor interaction
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108932804
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108932804
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108932804
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:sfm00535]
    108932804
Proteoglycans [BR:sfm00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   108932804
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 108932804
NCBI-ProteinID: XP_018604909
UniProt: A0A8C9RR78
LinkDB
Position
4:complement(9288115..9309742)
AA seq 683 aa
MMMGSSAASSRGPGTIALLLVLCALPCSAQRGPPGPPGVPGIDGITGDRGPDGPEGPPGP
DGDAGGPGSPGVPGFPGADGLTGAVGDPGPDGPAGQKGEPGKPGPRGPAGAGDDGAPGPP
GPGGSFGEPGKVGPPGAMGVRGPQGPRGPSGPPGAAGVHGATAELCANACPPGPPGHPGL
PGMKGHKGVKGESGEPGKQGHKGEEGDQGPPGEIGAQGPIGLQGLRGIMGMMGSKGELGP
RGHDGEPGPQGVQGATGDRGQRGLVGETGPKGDQGPQGRRGITGLPGPKGGSGLPGVDGR
EGIPGMPGPKGDAGQPGAPGEVGPQGLPGLPGSPGAKGASGEKGNAGDPGLAGTVGSPGK
RGDRGEQGEVGPVGPIGGPGDVGEQGPTGPPGLPGSRGPKGDLGLPGLPGPHGLPGIKGE
RGDAGEPGPKGEQGDPGAEGTLGEKGDLGSEGESGPKGSTGDPGEPGKRGPDGSRGQPGI
QGPPGSPGPRGMQGDRGFPGVTGSQGPPGKEPRDEHIKQVCMRVMQEQLAQLAASLRRPE
SGAVGLPGRPGYPGPPGPPGDSGFPGQAGARGLPGLKGPPGPIGLKGPKGEMGDRGDRGP
TVRGSKGQPGVPGLPGEPGKSGYGRDGRDGERGPPGVPGQPGVPGVPGPAGPNGYCDPSA
CNLQAIAAPPSLKDSSMKGPGGN
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgatgatgggcagcagcgcagcctccagtcgcggacccgggacaatcgcgctccttctt
gtgctctgcgcgctcccgtgctcggcccagagaggtccccctggtcccccaggtgtccct
ggaattgatggcataactggtgaccgaggtcccgatggtcccgaaggtcctcctggcccg
gatggggatgctggtggacccggatctcctggagtgccagggtttcccggtgctgatggt
ttgactggcgctgtaggagatcctgggccggatggtcccgccggacagaaaggtgaacca
gggaagcctggaccacgaggaccagcaggtgccggagatgatggagctcctggaccacca
gggcccggagggtctttcggtgaacctggcaaagtcggaccccctggtgccatgggagtg
agagggccgcaggggcctaggggaccgtcgggacctccaggagctgctggggtccatgga
gctactgctgagttgtgcgctaacgcttgtccaccaggcccacctggtcacccagggctt
ccaggcatgaagggccacaaaggtgtgaaaggagaatctggtgagcctggaaagcaaggg
cacaagggtgaagaaggggatcaagggcctccaggggaaattggagcacaaggccccatt
ggtcttcaaggactcaggggaatcatggggatgatgggatccaaaggagaattgggacct
cgaggccatgatggagagccaggtccccagggtgtccagggtgccactggtgaccgaggc
cagcgaggcttggtgggtgaaactggcccaaaaggggatcaagggcctcaaggacggagg
ggaatcacaggtcttcctggacccaaaggagggagcggactgccaggggtggatggtcga
gagggaattcctggaatgccagggccaaagggtgatgctggacaaccaggggctcctggg
gaggtgggaccccaaggacttcctggcttgcctgggtctcctggtgccaagggagctagt
ggtgaaaagggtaatgctggtgatccaggtcttgcaggaacagtgggatctcctggtaag
aggggagatcgtggtgagcaaggagaagtaggacctgttggaccaataggtgggccaggt
gatgtgggagaacagggtccgactgggccccctggcctgcctggctccaggggacctaaa
ggggacctcggcctacctggactcccaggaccccatggccttccaggaattaagggcgag
aggggtgatgctggagaaccagggcctaaaggcgagcagggagatccaggtgcagaagga
actctaggggaaaaaggagacttgggtagcgagggagaatctggacctaaaggatcaact
ggtgatcccggtgagcctgggaagagaggcccagacggaagcagaggacagcctggaatt
cagggaccgcccggttcccctggcccccgtggcatgcaaggagacagaggctttccgggg
gtcaccgggtcacaaggaccaccgggcaaagagccacgtgatgagcacatcaagcaagtt
tgcatgcgagtgatgcaggagcagttagcccaactggctgccagcctaaggagacctgag
tctggagctgttggcctgcctggccgacctggataccctggtcctcctggtcccccgggg
gacagcggcttccccgggcaggctggagcaagagggttaccaggcctaaaagggccccca
gggccgatcggacttaagggacctaaaggtgagatgggagacagaggggacagaggacct
actgtacgagggtccaagggccagcctggagttccgggtctgccaggtgaaccaggcaaa
tccggctacggcagggatgggcgcgatggcgagaggggaccaccaggtgttcctggtcag
cctggtgtcccaggtgttcctggccctgcgggtcccaacggctactgcgacccatcagcc
tgtaacctgcaggccattgcagcacccccatctctgaaggactccagcatgaaagggcct
ggaggaaactga

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