Scleropages formosus (Asian bonytongue): 108934928
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Entry
108934928 CDS
T04919
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108934928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108934928
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108934928
Complex C
U4/U6.U5 tri-SnRNP related factors
108934928
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
108934928
NCBI-ProteinID:
XP_018608664
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All DBs
Position
3:complement(18491258..18495601)
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AA seq
554 aa
AA seq
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MMASNAVAANPQQTQVVNKPAGSGKHGNVLPLWGNEKTMNLNPMILTNILSSPYFKVQLY
ELKTYHEVVDEIYFKVSHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFT
LKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPADLWDWFESFLDDEEISLVQQELDVK
AGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQQIKSRPRKPPQKEIQEESTQ
EPSRQANHRRSRTPRRTPSPRRSPNRSRSRSHHRDRNRASFDRELERERDRQRREREGKD
RDHDRRDRAGKEHRHSRSPDRTVERRRSRSKDSRRSRSISRDRRNDRKEREAESDRERRR
DRDHNRDRVSDRERSKDKGAKGDVEDRKHEDKHREERRMRKSSRSKSRDRKNKRSRSRER
SRKRSQSREKADKRSRSRERLDKRSRSKERLRHRSRSRKRSRHRSQSRERVHKRSRSRDK
AEKRSRSTEQLAKRSRSKDRADDHSQSRDRSAKRSRSKDRAHRRDNSDVKEDQRRRSESA
DRRGRKERSREKSA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgatggccagcaacgccgtggccgcgaacccgcagcagacccaggtcgtgaataaaccc
gctggctcgggtaaacacggcaacgtgctgcctctgtgggggaacgagaagactatgaac
ctgaacccgatgatcctgaccaacatcctgtcatctccctactttaaggtgcagctgtac
gagctcaagacgtaccatgaggtcgtggacgaaatatacttcaaggtgtctcatgtggag
ccttgggaaaagggaagcaggaaaacggcaggccagacgggcatgtgtggaggggtccgt
ggggtcgggactggaggcatagtctccactgcgttttgcctgctctacaaactgttcact
ctgaagctgactcgtaagcaggtgatgggactcatcactcacactgactctccctacatc
agagccctaggcttcatgtacataaggtacactcaaccacctgcggatctctgggactgg
tttgagtcgttcctcgatgacgaagagatctcccttgtgcagcaggaactggatgtaaag
gctggaggcggttgtgtcatgaccattggggaaatgctacgttctttcctcaccaagctg
gagtggttctctacattgttcccacgcatccctgttccagtccagaaggcgatcgaccag
cagataaagagccggccaagaaagcccccacagaaagagattcaggaagagtccacccaa
gagccatcacgacaggccaaccatcggcgctccaggactccacgaagaacaccaagtcca
cggcgatcacccaataggtcacgaagccggagccaccaccgggataggaacagagcaagc
tttgaccgggagctagagagggagagggaccggcagaggagggagagggagggtaaggac
cgtgatcatgacagaagggatcgggcaggcaaagagcatcgccactcccgcagccctgac
cgaactgtagaacgacggcgcagtcggagcaaagacagtcgacggagccgtagcatcagc
cgggacaggagaaatgaccgcaaagagagggaggctgaaagtgatcgtgagaggagaaga
gaccgtgaccacaatagagaccgggtaagtgatagggagcggtccaaagacaaaggagcc
aaaggagatgtggaggatcggaagcatgaggacaagcacagggaagagcgcagaatgagg
aagagtagtcggagtaaaagtagggacaggaagaacaagcgcagtcgaagcagggaacgt
tcacgcaagcgcagccagagcagggaaaaggcagacaagcggagtcggagcagggagaga
ttggacaagcgcagcaggagcaaggagaggttacgacaccgcagccgaagcaggaagaga
tctcggcaccgcagccagagcagggagagggtacacaagcgcagtcggagtagagacaag
gcagaaaagcgcagcaggagcacggagcagttagccaagcgtagccggagcaaggacaga
gcagatgaccatagccagagcagggacaggtcagccaagcgcagccgaagcaaagaccga
gctcaccgccgagataacagtgatgtgaaggaagaccaacgccgacgaagtgaaagtgcg
gacagaaggggcagaaaggagaggagcagagagaagtcagcctaa
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