Scleropages formosus (Asian bonytongue): 108937212
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Entry
108937212 CDS
T04919
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04020
Calcium signaling pathway
sfm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108937212
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108937212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108937212
Ion channels [BR:
sfm04040
]
Ligand-gated channels
Glutamate (ionotropic)
108937212
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
108937212
NCBI-ProteinID:
XP_018612526
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All DBs
Position
8:complement(27370922..27406818)
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AA seq
1391 aa
AA seq
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MGVPPGRLSACLWPLSLPLLLFYAVPCCLGRPFGPPVPPVNVAVVFSGSSYQMEIKGRLS
RENFLDLPLEVNPITVLVNDTNPRALLTRICDALAANRVQGVVFEDNVGSEAVAQILDFI
STQTAVPIVGISGGSAVVLPYKGDGSRFLQLGSSIEQQINCMFKVMEEYNWDSFVVITSL
YPGYEDFVEYIHSFTDTSYFLWDLQDVLTFDMAEGASDIRARRLLQQIDAQVLLVYCSHE
EASYLFRLADEAGLLGPGFIWIAPSLVVGNPDAPPPNSFPVGLISVITDRWRTSLRKRVR
DGVAIVVKGVLNFRRHQGLLPESHSDCHNPVKPPRNSSLYNYMLNVTWEDKDFSFNSEGY
LVNPSMVVITLDRERQWDKVGNYETGILQMRYPVWPRYGRYLEPVSDNRHLTVATLEERP
FVIVESVDPVTGTCVSNTVPCRRQSNKSEPIIGHTEPYTKLCCKGFCIDILKKLSRNIKF
SYDLYLVTNGKHGKLVRGTWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVETGI
SVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNRNLVSAKD
PGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFM
IQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHAHMVKYNQKGV
EEALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWKR
PIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSLL
VFAWEHLLYWKLRHSVRRSDRLDFLLAISRGIYSCFNGVEDTDRSGSMQSPDVTTGYTQA
NMLKMLQTAKDIVSSARVEDSLDHATRTIENWGRRGDPSAPALPTRVPAAGDALPGRHPY
VPSVTDNHLSPCLPPRALSPAFLGHSSDSATQPLLEKQRGASSHRPTPLRYTLPARGRHN
LYDRTLPISSLSSPQLAIREPEPAASSHPSGRTRHLAGPTLFVPYGDAHLPDLYQEHRLP
SCRRLYADGLSRKKRSQSFLVEGPEARRRHDNQEPSTCFAELRASQLVDRHGHPHSHTHS
HAGPRASAGCGSCVKPYLEPELEDVPLLGKEKLNRRASFLRATWAGDRLRPLEDKPSHRA
VVPDLFPRVVLAGGPKPPELRAEAGRSLCYSGAEHTYLSPTHLYRGQRLKYSQSTRLPSY
HEAVLHNTAAMRRSSTVVHRHYATYLNSYTDLPVYVGPLAPGPPHFYEHSRETCDIFPCM
GHHPNSTALVPTRLSNRQPAYGGYEGVERDQRVLPGAVGGRERRQLLVARTVSSPYLPKP
WARVSSLESEV
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcctccaggtcgactgagcgcctgtctttggccgctgtcactgccgctgttg
ctattctacgccgtcccttgctgcctgggccgtccgttcggcccacccgtcccgccggtc
aacgtggcggtggtgttcagcggctcctcctaccagatggagatcaaagggaggctgagc
cgggaaaacttcctggacctgccgctggaggtcaaccccatcaccgtgctggtgaacgac
accaacccgcgcgccctgctcacgcgcatctgcgatgccttggcagccaaccgcgttcag
ggcgtggtcttcgaggacaacgtgggctccgaggccgtggcccagatcctggatttcatc
tcgacgcagacggccgtgcccatcgtgggcatcagcgggggttcggcggtcgtgctgccc
tacaagggtgacggctccagattccttcagctgggatcatccattgagcagcagatcaac
tgcatgttcaaggtgatggaggagtacaattgggacagctttgtggtgatcaccagcctc
taccctgggtacgaggactttgtggagtacatccactccttcacagacaccagctacttc
ctatgggacctgcaggacgtgctgacctttgacatggcggagggggccagtgacattcgg
gcgcgtcggctgctgcagcagatcgatgctcaggtgctactggtgtactgctcgcacgag
gaggcgagctacctgttccgactggcggacgaggcaggcctgctgggcccgggattcatc
tggatcgcacccagcctggtggtgggcaacccggacgcaccgccaccaaacagtttccca
gtgggcctcatcagcgtcatcactgaccgctggcgcaccagcctgaggaagcgggtgcga
gatggagtggccattgtggtcaaaggcgttctgaacttccgcaggcaccagggactcctc
ccagagagccacagcgactgccacaaccccgtcaagcctccccggaacagctctctctac
aactacatgttgaatgtgacatgggaggacaaggacttctccttcaacagtgaggggtac
ttggtcaacccctccatggtggtcatcaccttggatcgagagcgacagtgggacaaggtt
ggcaactatgagacggggatcctgcagatgcgctacccagtgtggccacgttacggccgt
tacctggagcccgtgtcggacaaccggcatttgactgtggcaaccctagaggagcggcct
tttgtcattgtggagagcgtggaccctgtcacgggcacctgtgtcagcaacaccgtgcct
tgtcggcgtcagtccaacaagagcgaacccatcatcggccacacggagccctacacgaag
ctttgctgcaagggcttctgcatcgacatcctcaagaaactctcgcgcaacatcaagttc
tcctacgacctctacctggtgaccaacggcaagcatggcaagctggtccggggaacctgg
aacgggatgattggagaggtggtgtacaagcgggcagatatggccatcggctccctcacc
atcaacgaggagcgctcggagatcattgacttctccgtgccattcgtggagacagggatc
agcgtgatggtcgctcggagcaacggaacagtgtcgccgtctgcctttcttgaaccctac
agtcctgctgtgtgggtgatgatgtttgtcatgtgcctgaccgtggtggccatcaccgtg
tttgtctttgagtacttcagccccgtcggttacaaccgcaaccttgtaagcgccaaagac
cctggtggtccaaccttcaccatcgggaagtcagtctggcttctgtggggcatcgtgttc
aacaactcagtccccattgaaaaccccaagggcaccaccagcaagatcatggtgttggtg
tgggctttcttcgccgtcatcttcctggccagctacactgccaaccttgcggccttcatg
atccaggagcagtacattgacactgtctctgggcttagtgacaagaagttccagaaacca
caggagcagtacccacccttccgattcgggacggtccccaatggcagcacggagaggaac
atccgtagcaactacccggagatgcatgctcacatggtcaaatacaaccagaaaggtgtc
gaggaagccctaaacagcctcaaaacggggaagctggatgctttcatctacgatgcagcc
gtgctcaactacatggctggcaaagacgagggctgcaagctggtgaccattggcagcggc
aaggtgttcgccaccacaggctatggcatcgccctacagaaggagtcccgctggaagcgc
cccatcgatttggccctgttgcagttcctggctgatggtgacacccagaagctgcagacg
gtgtggctaacgggaatctgtcgcaacgagaagaaagaggtgatgagctccaaactggac
atcgacaacatggcaggggtcttttacatgctgctggtggccatgggcctgagtctactg
gtctttgcctgggagcacctgctctactggaagctgcgtcactccgtgcgtcgctctgac
cgcctggacttcctgctcgccatcagcaggggcatctacagctgcttcaatggcgtggaa
gacacggaccgctctggcagcatgcagagccccgatgtcaccacaggctacacccaggcc
aacatgctcaagatgctgcagaccgccaaggacatcgtgtcctctgcgcgggtggaggac
tcactggaccacgccacacgcaccatcgagaactggggcaggcgcggggacccatcagca
ccggcgttgcccactagagtgccagcagcaggagacgccctccctgggcgccacccctat
gtccccagtgtcacggacaaccacctgtccccgtgcctcccgccacgggcactgtcacca
gccttcctcgggcacagcagcgacagcgccacccagcccctactggagaagcaaagaggt
gcatcgtcacaccggcccacaccgctgcgctatacgctgcctgccagagggcgccacaac
ctctacgaccgcacgctgcccatttccagtctgagcagcccgcaactcgccataagggag
cctgagccagcagccagctcccacccgagtggcagaacgcgccaccttgctggccccacc
ctctttgtcccatatggggacgcccaccttcctgacctctatcaggagcacaggctgcca
tcgtgtcggaggctgtatgctgacggcctgagccggaagaagcggtcacagagctttctg
gtggagggcccagaggccagaaggaggcatgacaaccaggagccatccacgtgctttgcc
gaactgagggccagccagctggtggataggcatgggcacccccacagccacacccacagt
catgccggcccgagggcgagcgctggctgcggctcctgcgtgaagccgtaccttgaacca
gagctggaggatgtgccgctgctagggaaggaaaagctgaaccgccgggcctccttcctt
cgggccacctgggctggtgaccgactgcggccgcttgaagacaagcctagtcaccgcgct
gttgtgccagacctcttccctcgcgtggtgctggcaggtggcccgaaaccaccagagctg
cgtgcagaagcagggcgcagtctgtgctactcgggggcggagcacacgtacctcagtcct
actcacctctacaggggacagaggctcaaatactcacaatcaacacggctgccctcctac
cacgaggccgtacttcacaacacagccgccatgcgccgctcgtccaccgtggtgcacagg
cattatgccacatacctgaactcttacacggaccttccagtctacgtggggcccctggca
ccaggccctcctcatttctatgagcactccagggaaacctgtgacatctttccctgcatg
ggccaccaccccaatagcacagccctggtaccgaccaggctgagcaacaggcagcctgcc
tatggtgggtatgagggcgtggagcgggaccagagggtgctgccaggggcagtgggtggc
agggaacggaggcagttgcttgtggctcgcacggtcagcagtccatacttgccgaagccc
tgggccagagtgtccagtctggaatcggaggtctga
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