Scleropages formosus (Asian bonytongue): 108938311
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Entry
108938311 CDS
T04919
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108938311 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108938311 (runx1)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
108938311 (runx1)
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Ortholog
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GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
108938311
NCBI-ProteinID:
XP_018614309
UniProt:
A0A8C9TMR3
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Position
12:13516086..13563695
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AA seq
529 aa
AA seq
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MSFVMPRTQERDRSQIRRGASPHLREKHKEGFKTEAPLPKRKSAACEKDPMASNSIFETF
SAYQPCFARDPAPGRRFTPPSTTLSPGKMSEALPLGAHDGSAAALVGKLRMADRSMVEVL
SDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDENYSA
ELRNATAAVKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDGPRE
PRRHRQKPEELVKPGTLAFSERLSELEQLRRSAMRGSPHHPPAPSSRPTLSSAPFSSSTH
SQIPDSRQMQTSPSWSYEQSYPYLGQISTASVHSATPISPGRASGMSALTDFSSRLSGPD
LAAFGDPRMAGLERSFGSLPSLPDGRFSDPRMHYPAGAFTYTPTPVTNAIGIGMSAMTGP
TGRYTYLPPPYPSGSAQGQGSPFQASTSPYHLYYSTSASSYQFSMMSGGERSPPRILPPC
TNASTGSALLNPSLPNQSEVVEAEGSHSSSPTSMGAGAGRLEEAVWRPY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcatgccccgaacccaggaacgggaccgaagtcaaattcgcaggggagca
tccccacacttgcgggagaagcacaaggaaggttttaaaaccgaggctccccttccaaaa
agaaagagcgctgcttgcgagaaggaccccatggcttccaatagcatttttgagaccttc
tctgcctaccagccatgctttgcaagagacccggccccagggcgccgcttcacgcccccg
tccaccaccctgagcccgggcaagatgagcgaagccttgcccctgggggctcatgacggc
agcgccgccgccctggtggggaagctgcgcatggcagacaggagcatggtggaggtgctg
tccgaccaccccggggagctggtccgcaccgacagccccaacttcctgtgctccgtgctg
cccacccactggcgctgcaacaagaccctgcccatcgccttcaaggtggttgccctcggc
gatatcccggatggcaccctggtgaccgtgatggcgggtaatgatgagaactactcggcc
gagcttcgcaacgccaccgccgccgtcaagaaccaggtggctcgtttcaacgacctgcgc
tttgtgggccgcagcggtcgagggaagagcttcaccctgaccatcaccgtgttcaccaac
cccccccaggtggccacctaccagcgcgccatcaagatcacggtggacggcccgcgggaa
ccacgtcggcacaggcagaagccggaggagttggtgaagccgggcacgctggcattctct
gagcgactcagtgagctggagcagctgcgacgtagtgccatgagaggcagcccgcaccac
cccccggcgcccagctcccggcccaccctcagcagcgcccccttcagcagctccacacac
agccaaatccccgactccaggcaaatgcagacgtcaccctcctggtcctatgagcagtcg
tacccgtacttgggccaaatatccacggcgtccgtccactccgccacacccatctcgcca
ggccgtgcgagcggaatgtcggccctcacagacttctccagcaggctctcaggtcccgac
ctcgcagcgtttggcgacccgcgcatggcgggtctggagcggtccttcggctcgctgccc
tccctcccagacggtcgcttctctgacccgcgcatgcactaccctgcgggcgctttcacc
tacacgcctaccccggtcaccaacgccatcggtatcggcatgtcagccatgaccggaccc
actggacgctacacctacctgcctcccccctatccgagcggctccgcccagggccagggc
agccccttccaggccagcacttccccgtaccacctttactacagcacctccgccagctcc
taccagttctccatgatgtccggaggggagcggtctccgccccgcatcctgccgccgtgc
acgaacgcctcgaccggctctgccctgctcaatccctccttgcccaatcagagcgaagtg
gtggaggctgagggaagtcacagcagctcccccaccagcatgggggccggagcggggcgc
ttggaggaggccgtgtggcgcccatattga
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