Shigella flexneri 2003036: SFy_2809
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Entry
SFy_2809 CDS
T03267
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn02020
Two-component system
sfn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFy_2809
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SFy_2809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfn03021
]
SFy_2809
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sfn02035
]
SFy_2809
Transcription machinery [BR:
sfn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFy_2809
Bacterial motility proteins [BR:
sfn02035
]
Flagellar system
Flagellar assembly proteins
Stator
SFy_2809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_37
UPF0122
UPF0147
ThiD2
TFIIE_alpha
DSBA
SapB_1
DUF1690
Motif
Other DBs
NCBI-ProteinID:
AIL36154
LinkDB
All DBs
Position
complement(2016582..2017067)
Genome browser
AA seq
161 aa
AA seq
DB search
MLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEVAERLGIDIADYRQMLLDT
NNSQLFSYDEWREEHGDSIELVTDDHQRENQLQQLLDSNLRQRVMEAIETLPEREKLVLT
LYYQEELNLKEIGAVLEVGESRVSQLHSQDIKRLRTKLGKL
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgt
gaagtggcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaact
gaggtagcggaacgtttagggatcgatattgccgattatcgtcaaatgctgctcgacacc
aataacagccagctcttctcctacgatgagtggcgtgaagagcacggcgatagcatcgaa
ctggttactgatgatcatcagcgagaaaaccagctacaacaactgctggacagtaatctg
cgccagcgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaacc
ctctattaccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaa
tcgcgggtcagtcagttacacagccaggacattaaacggttacgcactaaactgggtaag
ttataa
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integrated database retrieval system
