Shigella flexneri 2003036: SFy_4217
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Entry
SFy_4217 CDS
T03267
Name
(GenBank) ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00330
Arginine and proline metabolism
sfn00480
Glutathione metabolism
sfn01100
Metabolic pathways
sfn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFy_4217
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SFy_4217
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SFy_4217
Enzymes [BR:
sfn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SFy_4217
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIL37239
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All DBs
Position
complement(3050994..3053129)
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AA seq
711 aa
AA seq
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MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPV
FLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFAC
PGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFH
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGTTPVYLEASRNP
FGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPFRLTIIQLGTYDGTVYNARQVIDTIG
HLCDYILFDSAWVGYEQFISMMADSSPLLLELNENDPGIFVTQLVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVELG
IESRKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQ
YFVDPCKLLLTTPGINAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAES
HEKLAQLVAMLAQFEQHIEDDSSLAEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDV
KDLQKAMFRQQSFPSVVMNPQDAHSAYIRGEVELVRIRDAEGRIAAEGALPYPPGVLCVV
PGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaatattgccgccagtagtgaactggtatcccgactttcttctcatcgc
cgcgtggtggcgttgggagatactgattttacggacgtcgcggcagtcgtcattaccgct
gcggatagtcgcagtggcattcttgcgttgcttaagcgcaccggttttcatctaccggtg
tttttgtattccgaacatgctgttgaattacctgcgggcgttacggcggtaatcaacggc
aacgagcagcagtggctggagctggaatccgcagcctgtcagtatgaagagaatttgctg
ccaccgttttatgacacgctgacgcagtacgttgagatgggcaacagcacctttgcttgc
cctggacatcaacatggtgcgttctttaaaaagcatcctgccggacgccatttttacgat
ttctttggtgagaacgtctttcgcgccgatatgtgtaacgctgacgtaaaattgggcgat
ctgcttattcatgaaggatcggcgaaagatgcgcagaaattcgcagccaaagtctttcat
gccgataaaacctattttgtgctgaacggcacatcggcagcgaataaagtggtgacgaat
gcgctgttaacgcgtggcgatctggtgctcttcgaccgtaacaaccataagtcgaatcat
cacggcgcgctgattcaggcggggacgacgccggtctatctggaagcttcacgtaacccg
tttggtttcattggcggtattgatgcgcactgttttaatgaagagtatctgcgccagcaa
attcgcgacgttgcgccagaaaaagccgacctgccgcgcccgtttcgcctgacgattatt
cagctgggaacctatgacggcactgtctataacgcccgtcaggtgatcgataccattggg
catctgtgtgattacattctgtttgattccgcgtgggtcggttacgaacagtttatctcg
atgatggcggatagctcgccgctgctgttagaacttaacgaaaacgatccggggattttt
gtgacccagttggtgcacaaacagcaggctggattctcacagacgtcgcagatccataaa
aaagataaccatatccgcggacaggcgcgtttttgcccgcataagcggttgaataacgcc
tttatgctccatgcttctaccagccctttctatccgctgtttgctgcactggatgttaac
gccaaaattcatgaaggggagagtgggcgtcggctgtgggctgagtgcgttgagttgggt
attgagtcgcgcaaggctattcttgcgcgctgtaagctgttccgcccgtttatcccgccc
gttgttgatggcaaattgtggcaggattatccgacatcagtgttagccagcgaccgccgt
tttttcagttttgagccgggggcgaagtggcacggctttgaaggatatgccgcggatcag
tattttgttgatccgtgcaagctgttactcactacaccaggtatcaatgccgaaaccggc
gaatatagcgactttggcgttccggcgacgattctggcgcactatctgcgtgagaacggc
attgtgccggagaagtgcgatctcaactccattctgttcttattaactccggcggaaagc
cacgagaagctggcacaactggtggcgatgctggcgcaatttgaacagcatattgaggat
gactcgtcgctggctgaggtgttgccgagcgtttataacaaatatccggtgcgctatcgc
gactacaccctgcgccagttgtgtcaggagatgcacgatctgtatgtcagtttcgacgtc
aaagacctacaaaaagcgatgttccgccagcagagtttcccgtcagtggtgatgaacccc
caggatgcgcatagcgcttatattcgcggtgaagtggagttggtgcggattcgtgatgcc
gaagggcgaattgcggcagaaggggcgttgccttatccacctggcgtgctttgcgtggta
cccggggaagtctggggtggggcggttcaacgttatttccttgcgctggaagaaggcgtg
aatttgttgccgggattttcgccggagttgcaaggtgtctatagcgaaaccgatgcggat
ggcatgaaacgattgtacggttatgtgttgaagtaa
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