Salvelinus fontinalis (brook trout): 129813999
Help
Entry
129813999 CDS
T11136
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129813999 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129813999 (ss18)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129813999 (ss18)
GBAF(ncBAF) complex
129813999 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
129813999
NCBI-ProteinID:
XP_055722678
LinkDB
All DBs
Position
17:23607869..23622870
Genome browser
AA seq
449 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNQSGAPGPQPPHGHNMP
SEGMVSGGPPAPHMQSQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGSMNMPPSSHGSMG
GYNHAVPSSQSMPAQGQMNMTQGPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNIPPGGG
GQHYQGQQNPMGMMGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASE
GGLLQPPFPDQGFDPSEQYYQGERDPAANQQSPYEKDNERDPAANQQSPYEKDHGNAQYG
QQQEAYQQGPPQQQGYPPQQQYPGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAY
RGPQPGPPQAQQQRPYPGYDQGQYGNYQQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcatagacaacgtggaaagggtgatataacacccactgga
attcaaaagttactggatgaaaacaatcagctgattcaatgtataatggacttccagagc
aaaggaaagacagcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcccccagaggtaaagcttgaacctcctactcagaacatgcccatgggccct
ggtgggatgaaccagagcggagcgccgggcccccagcccccccacggacacaacatgccc
tctgagggcatggtcagtggcggacccccagccccacacatgcagagccagatgaacgga
cagatgcctgggcctaatcacatgcctatgcagggccctgggccgggtcccaaccagccc
cccaacatgcctggcagcggctccatgaacatgccccccagcagccatggctctatgggc
ggctacaaccacgctgtgccctcctctcagagcatgcctgcccagggccagatgaacatg
acccaaggacccatgggtaactacggcccccggcccaacatgaacatgcagcctaaccaa
ggccccatgatgcaccagcagcctccctcccagcagtacaacataccccctggaggtggc
gggcagcactaccagggccagcagaaccccatgggcatgatgggccaggggaaccatgtg
atggggcagaggcccatgcccccttacagacccccacagcaaggaccccctcagcagtac
ccagggcaggaagactactatggggaccagtacagtcacgcaggacagggagcctcagaa
ggtggtttactacagccaccgttccctgatcaaggctttgatccctcagaacaatactac
caaggagagcgagacccagcagccaaccaacagtccccctatgaaaaagataatgagcga
gacccagcagccaaccaacagtccccctatgaaaaagatcatggtaatgcccagtatggc
cagcagcaggaggcctaccagcaaggtcctccccagcagcagggctaccccccacagcag
cagtaccccggacagcagggataccctggaccgcaacagggctacggtccgtcccaggga
gccccaggccagtacccccagggttacccccagggtcaggggcagcagtacggggcctac
cggggcccccagcccggcccccctcaggcccagcagcaacgcccatacccaggctacgat
cagggtcaatatggaaattaccagcaatga
DBGET
integrated database retrieval system
