Salvelinus fontinalis (brook trout): 129814791
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Entry
129814791 CDS
T11136
Symbol
sdc4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04512
ECM-receptor interaction
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129814791 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
129814791 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129814791 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfon00535
]
129814791 (sdc4)
Proteoglycans [BR:
sfon00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
129814791 (sdc4)
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GFIT
Motif
Pfam:
Syndecan
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
129814791
NCBI-ProteinID:
XP_055723796
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Position
18:complement(1331226..1343127)
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AA seq
209 aa
AA seq
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MHKVFLVLFLFGSVYSESVRETETWMPMKMTQAVSHDELVASGDAPNGSDFGFPDEERDT
FDNEDETDDDEDFSGSGDEVTTITLKNDKTMTKPDMNDNKIPDLDRPLMSKPTPNEIEQV
QKNNEVSVRGAPKPEEYPSNVLMAHAGEESVFRKTEVLAALIAGGAVGLLFAVFLVLLLV
YRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagtcttcctcgtgttgtttttatttggctccgtctactctgagtcggtgcgg
gagactgagacatggatgcccatgaagatgacccaagccgtgtcgcatgacgagcttgtt
gcgtctggtgacgcccccaacggctccgactttggcttccccgatgaggagcgcgacaca
tttgacaatgaggatgaaacggatgatgatgaagacttctctggctctggagatgaagta
actactattacactcaagaatgacaaaaccatgacaaagcctgacatgaacgacaacaag
atcccagacctggacagacccctgatgtccaaacccacaccaaatgagattgaacaggtc
cagaagaacaatgaagtgtccgtgcggggtgctcccaaacccgaggagtacccatcaaac
gtactgatggcccatgcaggggaggagagcgtcttcagaaaaacagaggtcttagcagct
ctgattgctggtggagcagtggggctgctctttgccgtcttcctcgtccttctgctcgtc
tatcgcatgaagaagaaggacgaaggcagctacgacctgggaaagaagcccatttacaaa
aaggctccgacaacggagatctatgcctga
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