Salvelinus fontinalis (brook trout): 129816446
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Entry
129816446 CDS
T11136
Symbol
nalcn
Name
(RefSeq) sodium leak channel non-selective protein isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129816446 (nalcn)
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
129816446 (nalcn)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF5914
PsaF
FAM165
Motif
Other DBs
NCBI-GeneID:
129816446
NCBI-ProteinID:
XP_055726917
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Position
19:complement(17297430..17569931)
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AA seq
1823 aa
AA seq
DB search
MSLRERHTATDNREYTHLSQTWLNDDKDYIELAGFSVFRQDRASTSGNPKLLIEHHAPPV
YLWLVSLPPSDLGMNAPMRSQLTIHSLYSTASPSMLKRKQSSRVEAQPMTDFGPDETLAD
SADIFWINKPWVHSLLRACAIISVISVCMNTPKTFEHYPPLQYVTFTLDTLLMFLYTAEM
IAKMHIRGIIKGDNSYVKDRWCMFDGFMVFFLWVSLVLQVFEIADVVDQMSPWGMLRIPR
ALIMIRAFRIYFRFELPRSRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFNHH
CVTNDTTNGTVTWNSLAIPDTHCSPDGEGYLCPLGFKCVDLEELGLSRQELGYSGFNELG
TSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAE
IRVQFQQMWGSRSSTTSTATTQMFHEDSAGGWQLVAVDVNKPHGRAPACLQQLMRSSIFH
MFILTMVAVDVIVAASNYYKGENHQRHYDEFYLAEVAFTVLFDLEAMLKVWCLGFTGYII
SSLHKFELLLVVGTTLHIYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLG
SLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLVAV
GQMWAPVVAIYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKL
PLRLRIFEKFPNRPQMVKISKLPSDFTVPRIRESFMKQFIDRQQQDTSCLFRRLPSASSS
SCDHSKRSAIEDNKYIDQKLRRSIFSIRARNLLEKETTINKILRACTRQRMLSGSFEGQP
LKERSILSVQHHIRQERRSLRHGSTSQRISRGKSLETLTQDQESEQRSHWHPHSSTVRYR
NAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRTVVRA
RFNASKTDPVTGAVNSKYHQLYDLLGLVTYLDWVMIVVTICSCISMMFESPFTRVMHVPT
LQFQIGEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLCSLIFLCWLPPN
VPPESGAQLLMMLRCLRPLRIFKLVPQMRKVVREVIKGFKEIFLVSILLLTLMLVFASFG
VQLFAGKLAKCNDPHVFLREDCHGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRN
FNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVV
IANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPENAGFRAKMYDITQHPFFKRG
IAVLVLAQSVLLSVKWDVDDPVTMPLATMSVVFTIIFVLEVTMKFIAMSPAGYWQSRRNR
YDLLVTILGVIWIILHFALLNAYTYMMGTCVIVFRFFTICGKHVTLKMLLLTVVVSMYKS
FFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSTAGKAITVLFRIVTGEDWNKIM
HDCMVQPPFCTPDKHRYWETDCGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENFSLFYS
TEEDQLLSYNDLRHFQIIWNNVDDKREGVIPTSRVKFLLRLLRGRLEVDLDKDKLLFKHM
CYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMW
LKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIQTTLPSEDINANQDHSTQPEL
SGLQQMLSPTLSDRGGYRQDSSERPQRKLGQWRLPAGRTSVKSMVCKMNPVSDEASSGSE
VKKWWTRQLTVESDESGDDLIDI
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgagagaacgacacactgccaccgataaccgggaatatacacacttatcgcag
acttggctgaacgacgacaaagattatatagagctggctggcttctccgtgtttcggcag
gacagagcatctacatctggtaaccctaagctactgatagagcatcacgctccccctgtc
tatctctggctggtctctctgcccccctctgacctggggatgaatgcaccaatgaggagc
cagctcacaatccactctctgtatagtacggccagccccagcatgctgaagaggaagcag
agctcgagggttgaggcccagcccatgactgactttgggcccgacgaaaccctcgccgac
agcgccgacatcttctggatcaacaaaccatgggtgcattctctgctgcgagcctgtgcc
atcatcagcgtcatcagcgtgtgtatgaacacacccaagacgttcgagcactaccccccg
ctgcagtacgtgacctttaccctggacacgctgctcatgttcctctacaccgccgagatg
atcgccaagatgcacatcagaggaatcatcaagggtgataactcgtacgtcaaggatcgc
tggtgtatgtttgacggcttcatggtcttcttcctctgggtgtctctggtgcttcaggtg
tttgagatagcggatgttgttgaccagatgtctccctggggcatgttgagaatccccaga
gccctcatcatgatccgagccttcaggatctacttccgcttcgagctgccacgctcacgc
atcaccaacatcctcaagcgatcaggggaacagatctggagtgtgtcgatattcttgctc
ttcttcctccttctgtatggaattctgggagttcagatgttcggaacgttcaatcatcac
tgcgttaccaacgacacaacgaatggtactgtgacatggaacagcctggccatccccgac
acccactgttcgccagacggggagggctacctgtgtcctttgggcttcaagtgtgtggac
ttggaagaactggggctcagcagacaggagctgggctacagcggcttcaacgagctcggt
acgagtatcttcaccgtgtacgaggcagcctctcaggagggctgggtgttccttatgtac
agagccatcgacagtttccctcgctggcgctcctacttctacttcatcacgctcatcttc
ttcctggcctggcttgtcaagaatgttttcattgcggtcatcattgaaacgtttgctgag
atcagagttcagttccagcagatgtgggggtcccgaagcagcaccacctctactgctacc
acacagatgttccacgaggactcggctggaggatggcagcttgttgctgtggacgtcaac
aaaccacatggccgcgcaccagcctgcctccagcaactgatgcgctcctccatcttccac
atgtttattctgactatggttgccgtagacgtaatcgttgccgctagcaactactacaag
ggcgagaaccaccaaaggcactatgacgagttctacctggctgaggttgcctttacagtg
ctgtttgacctggaggctatgcttaaggtctggtgcctgggcttcacgggctacatcatc
tcctctctacacaagtttgagttgctgctggtggtggggaccaccctgcacatctaccct
gacctctaccactcccagttcacctacttccaggtactgcgagtggtgcgtctgataaag
atctccccggcactagaggactttgtgtacaagatctttggtcccggtaagaagctgggc
agcttggtggtgttcacagcgagcctgctcatagtcatgtcagccatcagtctacagatg
ttctgcttcgtggaggaactggaccgattcaccacctttcccagagcattcatgtctatg
ttccagatcttaacccaggagggttgggtggacgtgatggaccaaactcttgtggccgtc
ggtcaaatgtgggctcccgtagtggcgatctacttcatcctctaccatctgttcgctact
ctgattctgctcagtcttttcgtggccgtcatccttgacaatctagagttggacgaagac
ctgaagaaactcaaacaactgaagcaaagtgaggcgaacgcagataccaaagagaagctg
cccctacgtctaaggatctttgagaagtttcctaatcggccccagatggtcaagatctcc
aagctgccttctgatttcactgtgcccagaatcagggagagtttcatgaagcagttcatc
gatcggcagcagcaggacaccagctgtctgttccgccgtctcccttctgcatcctcctct
tcctgtgaccattccaagcgatccgccatagaagacaacaaatacatcgaccagaagctc
cgcaggtcaatattcagcatcagagctcgcaacctcctggagaaggaaactacgatcaat
aaaattctccgggcttgtaccagacagcgtatgctgagtggatccttcgagggccaacca
ctgaaagagcgctccatcctcagtgtccaacaccatatacgccaagaacgcaggtctctg
agacatggctccactagtcagaggatcagcagaggaaagtccctggagacactcacacaa
gatcaagagtcagagcagagatcacactggcacccgcattccagcacagtgcgttatcgt
aacgcccagcgagaagatagtgagatcaagatgatccaggagaaaaaggagcaggccgag
atgaagcggaaggtccaggaagaagaactgagggagaaccatccttactttgacaaacct
ctcttcattgtcgggagagagcaccgcttcagaaacttctgtaggactgtagtgcgggca
cgcttcaatgcatccaaaacagatcctgtaacaggagcggtgaactccaaataccaccag
ctttatgatctcctggggctggttacctatctggactgggtgatgatcgtagtgaccatc
tgctcctgtatttccatgatgtttgagtctcctttcaccagggtcatgcatgtacccact
ctacagtttcagataggagagtatgtctttgtcatcttcatgagtatcgagctgaacctg
aagatcatggcggacggcctgttctttactcccacggccgtcatcagagacttcggagga
gtcatggacatcttcatctacctctgtagtctgatcttcctgtgttggctgcctcctaac
gtgccgccggagtctggggctcagctgttgatgatgctgaggtgtcttcgccccctacgc
atctttaaactggtgccccagatgaggaaggtggtgcgggaggtcatcaagggcttcaag
gagattttcctggtctccatcctgctcctgacactaatgctggtgtttgcaagcttcggc
gtccagctctttgctggaaaactagccaagtgcaatgacccccacgtattccttcgggag
gactgccatggaatcttccggatcaacgtgagtgtgtctaaaaacctcaatctcaaacta
agaccaggagagaagaagcctggcttctgggtgccaagagtgtgggccaaccctcgcaac
tttaattttgacaatgtgggtaatgccatgctggctttgtttgaggtcctgtcactcaaa
ggctgggtggaggtccgtgatgtcatcattcaccgcgtcggaccgatccacggtatctac
atccacgtgtttgtctttctgggctgtatgattggactcactctgtttgtcggagtggtc
atcgctaacttcaatgagaacaagggtactgctctgttgacagtggaccagaggagatgg
gaggacctgaagagtcgactgaagattgcccagcctctccacctccccccacgcccagag
aatgcagggttccgtgccaagatgtatgacatcactcagcaccccttcttcaaacggggt
atcgctgtgctggttttggcccagtcagtgctgctgtctgtcaagtgggacgtagatgac
ccggtaacaatgccacttgctaccatgtcagtggtcttcaccattatctttgtgttagag
gtgacgatgaagttcatagctatgtccccggcggggtactggcagagcagacggaaccgc
tacgatttactggtgacaatactgggagtcatctggataatcttgcactttgctctactg
aatgcatatacttacatgatgggcacctgtgtgatcgtcttcaggttcttcaccatctgt
gggaagcatgtgactctgaagatgctactgctgacagtcgtggtcagtatgtataaaagc
ttcttcatcatcgtgggaatgttcctcctcctcctctgctacgccttcgctggagtcgtc
ctattcggaaccgtcaaatacggagagaacatcaacaggcatgctaacttctccacggca
ggcaaggccatcacggttctgttccgtattgtcactggggaagactggaataagatcatg
catgactgcatggtgcagcctccgttctgcacccccgataagcatcgctactgggagacg
gactgtgggaactacgcaggggcactcatctacttttgctccttctatgtcatcattgct
tacatcatgctcaacctcctcgtggccatcatcgtggagaacttctctctcttctactcc
actgaggaggaccagctactgagctacaacgacctccgacactttcagattatctggaac
aatgtggatgacaagagagagggagtgatcccaacatcgcgggtgaagttcctgctgcgt
ctgctgaggggcaggctggaggtcgacctggataaggacaagctgctgttcaaacacatg
tgctatgagatggagaggctgcacaacggaggggacgtcaccttccacgacgtgctcagt
atgttgtcataccgctcagtggatattaggaagtctctacagctggaggagctgctggct
agagagcagctggagtacaccatagaagaagaggtggccaagcagaccatacgcatgtgg
ctcaagaagtgcctcaaacgcatccgtgctaagcagcagcagtcgtgcagcatcatccac
agcctgagagagagccagcagcaggagctcagtcgcttcctcaacccccccagcatacag
accaccctgcctagtgaggacatcaacgctaaccaggaccattcaacacagccagagttg
agtggtctccaacagatgctgagtcctactctgtcagaccgtgggggatacagacaggac
tcctcagaacgccctcagaggaaactgggacagtggagactacctgcaggtcgtaccagt
gtcaagtccatggtgtgtaagatgaaccctgtgagtgacgaagcctcctcggggtcagag
gtcaagaaatggtggacgcgtcagctgaccgttgagagtgacgagagtggtgatgacctc
atagatatttaa
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