Salvelinus fontinalis (brook trout): 129819034
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Entry
129819034 CDS
T11136
Name
(RefSeq) zinc finger and BTB domain-containing protein 16-A-like isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129819034
04121 Ubiquitin system [BR:
sfon04121
]
129819034
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
129819034
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
129819034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_15
zf_UBZ
zf-C2H2_8
zf-C2H2_16
MIX
zf-C2H2_REST
zf-C2H2_2
Phage_zn_bind_3
Zn_ribbon_TiaS
zf-C2H2_11
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
129819034
NCBI-ProteinID:
XP_055731516
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Position
2:complement(41210472..41336002)
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AA seq
664 aa
AA seq
DB search
MDLTKMGMIHLQNPNHPTVLLQKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE
ILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQSSDDNDTEANMNDGGTEEEDERKGRQGGKNAKKHSMEGSYLSATQQASALDQSP
SVSTSFGLSTMSPTKAAVDSLMSIGQSLLQQGFGGEHLTHGNSHRQLMTEIKTEMMQVDE
GGGHESPRTMESSASSNGERSGELDKNRDGPGTPTRSSVITSARELHYVREDGMGDPQAD
GGQMGLEAMAGMTGMTEKQLTSLYSLPPNHKNEVMRSMPASMASSLHMSPALAMSMDFSA
YGGLLPQSFIQREFFNKLGELAAGMKPDGRNQHERCNVCGAELPDNEAVEQHRKLHSGMK
TYGCELCGKRFLDSLRLRMHLLSHSAGEKAIVCDQCGAQFQKEDALEAHRQIHTCLDMAI
FCLLCGKRFQTQPALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTAGDHPYECE
FCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQ
RSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEDVPPDWRIEKTYLY
LCYV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatttgactaaaatgggtatgatccacctccagaaccccaaccaccccacggtcctg
ctgcagaaggccaaccagatgcgtctggcagggaccctctgcgacgtggtcatcatggtg
gacagccaggagttccatgctcacagaaccgtgttggcctgcaccagcaagatgtttgag
attctgtttcaccgcaacagccagcattacaccctggacttcctttcaccaaagaccttc
cagcagatcctggagtacgcctacactgccacactccaggccaaagtggaagacctggac
gacctgctgtacgcagcagaaatcctagaaatcgagtacctggaggagcaatgtctcaag
atcctggagaccatccagtcctcggatgataatgacacagaggccaatatgaacgatggc
ggcacggaggaagaagacgagcgcaagggccggcaaggagggaagaacgctaagaagcat
tccatggaggggagctacctttcagccacccagcaagcctctgccctggaccagagcccc
tccgtctccacatcctttgggctctcaaccatgagcccaaccaaagctgccgtggacagc
ctgatgagcatcggccagtccctcctgcagcagggcttcgggggagagcacctgactcac
ggcaactcccaccgccaactgatgaccgagatcaagacggagatgatgcaagtggatgaa
ggcggaggccacgagagccccagaaccatggagtccagcgcctccagcaatggtgagagg
agcggcgagttggacaagaaccgtgacggcccagggaccccgaccaggagcagcgtgatc
acaagtgcccgcgagctgcactacgtccgggaggatggtatgggtgacccgcaagcagat
ggtggccaaatgggtctagaagccatggcgggcatgacagggatgaccgagaaacagctg
acctccctgtactctctgcctcccaatcataaaaacgaagttatgcgatccatgccggcc
tccatggcctcttctctccacatgtcccctgccctggccatgtccatggacttcagtgcc
tacgggggacttctgccccagagcttcatccagagggagttcttcaacaagctgggggag
ctggctgctggtatgaagccagacggcagaaaccagcacgaacgctgcaacgtgtgtggc
gcagagctaccagacaacgaagctgtggagcaacaccggaagctgcacagcggtatgaag
acctatggatgtgagctgtgtgggaaacgcttcctggacagcctacgccttaggatgcac
ttgctgtctcactctgctggtgagaaggccattgtctgtgaccagtgtggagcccagttc
cagaaggaggatgcgctggaggctcacagacagatccacacatgcttggacatggccatc
ttctgtctgctgtgcgggaagcgtttccagacgcagccggcgctgcagcagcacatggag
gtccacgccggcgtgcgcagctacatctgcagcgagtgcaatcgcaccttccccagccac
accgcactcaaacgccacctgcgctcgcacacagcaggtgaccatccatatgagtgcgag
ttctgcgggagctgcttccgtgacgagagcactctaaagggccacaagcgcatccacacc
ggggaaaagccctacgaatgtaacggctgtgggaagaagttcagcctcaagcaccagctg
gagacccactaccgtgtgcacacaggtgagaagccgtttgagtgcaagctgtgccaccag
cgatccagggactactcggccatgatcaaacacctgcgcacccacaacggcgcgtcgccc
taccaatgcaccatctgccttgagtactgccccagcctctcggccatgcagaagcacatg
aagggccacaagcccgaagacgtccccccagactggaggatagagaagacctacctgtac
ctctgctacgtctga
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