Salvelinus fontinalis (brook trout): 129822204
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Entry
129822204 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129822204
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129822204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129822204
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129822204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
129822204
NCBI-ProteinID:
XP_055736251
LinkDB
All DBs
Position
24:24642618..24651835
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AA seq
252 aa
AA seq
DB search
MSGGVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEF
EDPRDADDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGFGGGGGVGGAPRGRYGPPSRRS
EYRVIVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTK
FRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSRSRSRSAASRSRSNSRGGGTRGGRGSPR
YSPRHSRSRSRS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggcgtcgtgcgaggccctgcaggaaataacgattgtcgtatttacgtcgga
aatctaccccctgatattcgcaccaaagatgtcgaggacgtgttttacaaatatggagct
attcgcgacatcgacttgaaaaatcgaagaggaggacctccctttgcctttatcgaattt
gaagatcccagggatgccgacgatgcagtgtacggacgagacggctatgactacgacggt
tataggctgcgagttgaattccctcggagcggcaggggtggggggagaggcggctttggt
ggtggtgggggtgttggtggggcccctagaggcagatacgggccgccatccagacgctcc
gagtacagggtcattgtctcagggcttcctcagagtggcagctggcaggacctcaaggat
cacatgcgtgaggctggggatgtatgttatgctgacgttttcagagatggaactggagtt
gtggagtttgtgcgcaaagaagacatgacctacgctgttcgaaagctggataacaccaaa
ttccgatcacacgagggagagaccgcttacgttcgcgtgaaagtagatggtccccgcagc
ccgagctatggaagatcacgttccaggagccgcagtcgaagcaggagccgcagcgcagcc
agtcgcagccgcagcaactctcgcggtggtggtacccgtggtggcagaggatctcctcgc
tactctcctcgccatagccgctctcgctcccgttcctaa
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