Salvelinus fontinalis (brook trout): 129826490
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Entry
129826490 CDS
T11136
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129826490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129826490
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129826490
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Phage_Coat_A
CDC48_2
Motif
Other DBs
NCBI-GeneID:
129826490
NCBI-ProteinID:
XP_055743249
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All DBs
Position
28:complement(24825462..24837736)
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AA seq
309 aa
AA seq
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MFSFNMFDHPMPRTFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERCYKAPEEPTEEEGDPNTWTDMDMRFRAFTGSGNRLDGK
KKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPLPRKTTEDEDSEFIAFSGEGKS
LRKKGGRKL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgaccacccgatgccacggaccttccaaaaccgcttctcc
actcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtctgatgtg
gagaaaggaggaaaaattataatgccgccatctgcacttgaccaactaagcagacttaac
atcacctaccccatgttgttcaaacttaccaacaagaactcagacagaatgacacactgt
ggtgtcctggagtttgtagcagatgaggggatttgctacctgccacactggatgatgcag
aatctcctgctggaggaagggggcctggtccaggtggagagtgtgaacctcatggtggcc
acatactccaagttccagccacagagcccagacttcctggatatcactaaccccaaagca
gtgttggaaaatgccttgagaaactttgcctgcttaactacaggagatgttgtcgcaatt
aactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggcagtg
tctatcattgaatgtgatatgaatgtggattttgatgcgccgctgggttacaaagaacca
gagaggtgttacaaagcaccagaggagcccacagaggaggaaggagaccccaacacttgg
actgatatggacatgagattcagagctttcactggttcaggcaatcgtctggatggcaaa
aagaaaggcatcgagcccagccccgtccctatcgatcccagtgacattaaaagagggatt
cctaactatgagtacaaggttggcaggatcaccttcatcagaaactctaggcctttgccc
aggaaaacaacagaggatgaggattcagaattcatcgccttctctggcgagggaaagtca
ctacgcaagaaaggtggcagaaagctttga
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