Salvelinus fontinalis (brook trout): 129839752
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Entry
129839752 CDS
T11136
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04141
Protein processing in endoplasmic reticulum
sfon04210
Apoptosis
sfon04217
Necroptosis
sfon04218
Cellular senescence
sfon04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129839752
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129839752
04217 Necroptosis
129839752
04218 Cellular senescence
129839752
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129839752
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129839752
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
129839752
Peptidases and inhibitors [BR:
sfon01002
]
Cysteine peptidases
Family C2: calpain family
129839752
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
129839752
NCBI-ProteinID:
XP_055763360
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Position
3:14864972..14888006
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AA seq
704 aa
AA seq
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MYPFGGVSVRIQRERLHTEGMGTNERALKFLNQDYEALKQECLESGCLFEDPCFPTEPPS
LGFKELAPHSSKTQGVEWMRPTEFSDNPEFILGGATRTDICQGALGDCWLLAAIASLTLN
EKLLHRVVPHGQTFQDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLMFVHSAEGNEFW
SALVEKAYAKLSGSYEALSGGSTTEGFEDFTGGVAEFYELRKAPKDLYRIIGKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGQKQVDFRGRMERLIRIRNPWGQVEWTGAW
SDNSSEWDAIDPSEREDMNCHMEDGEFWMPFQEFLRQFSRLEICNLTADALSDDSQSFWN
TIKFDGGWRKGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEEACSFLVALMQKDRR
RYRRQGQDMHTIGFAIYEIPEEFKGCQSVHLKKDFFLKHSSCARSETFINLREVSARLRL
PPGEYLVVPSTFEPGKEADFVLRVFTEKQSETQELDDDVVANFEDEEDISESDIEDSFRA
MFAQLSGEDMEISVRELRTILNRVVTKHRDLQTDGFSMESCRGMVSLLDKDGSARLGIVE
FQILWNKIRKWLGIFRQFDLDKSGCMSSYEMRLALESAGFKLNNRLNQVLVARYAENEVI
DFDNFVCCLVKLGAMFKAFQELDREGTGTAEMNITEWLYMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtacccattcggaggggtctcagtgcgcatccagagggagagactacacaccgaggga
atgggaaccaatgagcgggcgctgaagttcctcaatcaggactacgaggccttgaagcag
gagtgcctggagagcggctgcctgttcgaggacccctgcttccccaccgagccaccttcc
cttggcttcaaagagctggcgccccactcatccaaaacccagggcgtggagtggatgagg
cccacagagttttcagataaccctgagttcattttgggcggcgccacaaggactgacatc
tgtcaaggagcactgggtgactgctggctcctggcagccattgcttccctcacccttaac
gagaagctgctacacagggtggtccctcatggtcaaaccttccaagacaactacgctggc
atcttccacttccagttctggcagtttggagagtgggtggatgttgtcattgatgatcga
ctgcctgtcaaagatggcaagctgatgtttgttcactccgctgagggtaacgagttctgg
agtgccctggttgagaaggcttatgccaaactgagtggctcctatgaggccttgtctggt
ggcagcaccacagagggctttgaggacttcaccggtggcgtggcagagttttacgagcta
cgtaaggcacctaaggatctgtaccggatcatcggtaaagccctggagagaggctccctt
ctgggctgttccattgacatcaccagtgccttcgacatggaagcagtgacctttaagaag
ctggttaaaggccatgcctactctgtcacaggtcagaagcaggtggatttccggggtcgc
atggagaggttgatccgtattcgtaacccctggggtcaggtggagtggaccggggcttgg
agtgataattcgtctgagtgggatgcgattgatccatcagagagggaggacatgaattgc
cacatggaggacggagagttctggatgcccttccaggagttcctgcgccagttttcccgg
ctggagatctgtaacttgacagcagacgctctgagtgatgacagccagagtttctggaac
accatcaagtttgacggaggctggaggaagggcagcacggctggaggctgccggaaccat
ccaaacaccttttggatcaacccccagtataagattaccctgctggaggaggacgacgac
cctgaggatgaagaggaggcctgcagcttcttggtggcgctcatgcagaaggataggcgc
cgctaccgacgccagggccaggacatgcacaccattggctttgccatctacgagattcca
gaagagtttaagggttgtcaaagtgttcacttgaagaaagacttcttcttgaagcactca
tcatgtgcacgttctgagacctttatcaacctgagggaggtgagcgcacggctgcgcctg
ccacccggggagtaccttgtggtaccctccaccttcgaacctgggaaagaggctgacttt
gtcctcagagtcttcactgagaagcagtcggagacacaagaactggatgatgatgtggtg
gcaaactttgaagatgaggaggacatctcagagagtgacattgaggactcattcagggcc
atgttcgctcagttatctggggaggacatggagatctctgtccgtgagctcagaaccatt
ctcaatagggtggtgaccaaacacagggacctgcagactgatggattcagcatggagtcc
tgtagaggcatggtcagcctattagacaaagatggctccgctcgccttggtatagttgag
tttcagattctgtggaataagatcaggaagtggctgggaatcttccgccagtttgatctg
gacaagtctggatgtatgagctcctatgagatgcgtctggccttggagtctgctggattc
aaactgaacaacaggctgaaccaggtgcttgtggccagatacgctgaaaatgaggtcatc
gactttgataactttgtctgctgtctggtcaagctaggagccatgttcaaggccttccag
gagttggatagagaaggcactggaactgctgaaatgaatatcacagagtggctgtatatg
accatgtgtggttga
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