Salvelinus fontinalis (brook trout): 129842488
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Entry
129842488 CDS
T11136
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
sfon04260
Cardiac muscle contraction
sfon04261
Adrenergic signaling in cardiomyocytes
sfon04270
Vascular smooth muscle contraction
sfon04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129842488
04020 Calcium signaling pathway
129842488
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129842488
09153 Circulatory system
04260 Cardiac muscle contraction
129842488
04261 Adrenergic signaling in cardiomyocytes
129842488
04270 Vascular smooth muscle contraction
129842488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129842488
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129842488
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
129842488
NCBI-ProteinID:
XP_055767034
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Position
3:28128040..28162627
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AA seq
1826 aa
AA seq
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MAESGGEPNLQSYIMDEETLKRKQKEKLKKLLATGGNPRPARSLFFLTLKNPFRKAAINI
VEWKPFEIIILLTIFANCVALAVFLPMPEEDSNNTNSNLESLEYIFLIVFSIECFLKIIA
YGFLFHENAYLRNCWNILDFVCVSVGLFAVIGDFITYISGVEAQPGDKGGGFDMKALRAF
RVLRPLRLVSGVPSLQVVMNSILKSMLPLFHISLLVFFMVTIYAIVGLELFKCKMHKTCY
YTGTNIIATVENEKASPCAQAGNGRRCTINGTECRTGWAGPNNGITHFDNLGFAMLTVYQ
CITTQGWTDVLYWVNDAIGMEWPWMYFLTLILVGSFFVLNLVLGVLSGEFTKEREKGKAR
GEYTEMRETQQLDEDLKGYMEWITQAEVMDADGEGQGLLTLEDGESEAGSLKDMDTMQKI
LYYYKLARKWNVFFRRKCLVYVKSRMFYWWVILLVFLNTLAIATEHHQQSQQLTEWQDTA
NKVLLSLFAIEMFMKMYALGLQQYFMSLFNRFDCFVVSTGILELVLVRMDVMTVMGISVL
RCIRLLRLLKVTKYWTSLSNLVVSLLNSTPSIACLLLLLFLFIVIFSLLGMQVFGGKFNF
PNAPKPRSTFDSFPQALISVFQILTGEDWNSVMYDGIMAHGGPTMPGILVSIYFIILFVC
GNYILLNVFLAIAVDNLAEAESLTMAQKEKSEEKKRKKLLRANMPDKATEEKALLAKKLA
AERAKIEGIPTTAKLRVDEFESNVNEIKDPFPPADFPGDDEEEEPDIPDTPRPRPMADLQ
LKEEVVPIPEASSFYIFSSDNKIRKLCHRIINATAFTNIILLFILLSSISLAAEDPIDPM
SFRNQVLASADVVFTSVFTVEVVLKMTVYGAIMHPGSFCRNSFNILDLIVVSVSLLSMLM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTLLLDFMFACI
GVQLFKGKFYACTDPDKMTEEECKGNYIRYQEGAIYPMTIHKREWINAELNFDNILEGML
ALFTVSTFEGWPKLLYKAIDSNMEDVGPIYNNRIAISIFFIVYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRACVEYALKARPLRCYIPKNQYQYNVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSTHVTDLSDMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNVF
DFVIVIGSVVDVILSEVDAALASSGGLYCLHGCAEVNPMQAIADSENARVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALIDGTYI
NRNNNFQTFPHAVLLLFRCATGEAWQEVMLACLYGKRCDPKSDYLPGEEMTCGASFAIIY
FISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFRKIWAEYDPEATGRIKHL
DVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFALVRTGLKIKTE
GNFEKANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGFRPTKNNAKNEIQAGLRSIEEEAAPELQRAISGDLMNEEEMDRAMEDAAEEGIFR
RAGGLFGNHVDSFTMEEGTRNPNATQVTSQRPLQMSRSDDVEATCSPAYHANEDFFPSTP
NKTNNNNVNNNAGESFSYGTYDRVQVYTISTSRSSPDRDWQLQTVAGPRQDAETHREPLS
PQQAQAQGPDSAFDTLIQEVLINGGLESLARDPRFVSVTKREMAEALNFDPVDMESSATE
LMNGRRGSVATLPIRPPRRSQRKANQ
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtggcggcgagcctaacctgcagtcctacattatggacgaggaaactctg
aagaggaagcagaaggagaagctgaagaagctcctggccacggggggaaaccctcggccc
gcacgctccctcttcttcctcaccctgaagaaccccttccgcaaggctgccatcaacatt
gtggaatggaaaccatttgagatcatcatcctgctgaccatctttgccaactgtgtggcc
ctggctgtgttcctgcccatgcctgaggaggacagcaataacaccaacagcaacctggaa
agtctggagtacatcttcctcatcgtcttctccatagagtgctttctaaagataatagcc
tatggatttctatttcacgagaatgcgtatctgcggaactgttggaacatactggatttt
gtctgtgtatctgtggggctgtttgcagtcatcggggacttcatcacctatatcagtggt
gtggaggctcaaccaggggacaagggaggaggcttcgacatgaaggccctcagggcattc
agggtgctccggcccctcaggctggtctctggagtccccagcctgcaggtggtgatgaac
tccatcctgaaatccatgctacctctgttccacatctccctgctggtcttcttcatggtc
accatctacgccatcgtgggactggagctgttcaagtgcaagatgcataaaacctgctac
tacacaggcacaaatatcatagccacagtggagaatgagaaggcatctccgtgtgcccag
gccggtaatggtcggcgctgcaccatcaatgggacagagtgtaggacgggatgggccgga
cccaacaacggcatcacacactttgacaacctgggcttcgctatgctcactgtttaccag
tgcatcactacccagggctggaccgacgtgctctactgggtgaatgatgccatcggtatg
gagtggccgtggatgtactttctgacgctcatcttggttggctccttcttcgtactcaac
ctggttctgggcgtgctcagtggtgaattcactaaggagcgagagaagggtaaggcgcgt
ggagagtacacagagatgagggagacccagcagctggatgaggatctgaagggctacatg
gagtggatcacacaggccgaagtcatggacgccgacggggagggacagggcctgctaacg
ctggaggatggagaatccgaggcagggagcctaaaggacatggacaccatgcaaaaaatc
ctgtactactacaagctggctcgtaaatggaacgttttcttccggcgtaagtgtcttgtg
tatgtgaagtcccgtatgttctactggtgggtgatccttctggtgtttctgaacacgctg
gccatcgctactgaacaccaccagcagtcccagcaactcaccgagtggcaagacactgcc
aacaaggtgctgctgtctctgttcgccattgagatgtttatgaagatgtacgccctgggt
ctccagcaatacttcatgtctctgttcaaccgcttcgactgctttgtggtctccaccggc
attctggaactcgtcctggtccgcatggacgtcatgactgtcatggggatctctgtgctg
cgctgcattcgactacttaggctgctcaaagtaaccaagtactggacgtctctcagtaat
ctggtggtgtccctgctgaactcaaccccctccattgcctgcctgctcctcctcctcttc
ctcttcatcgtcatcttctctctgctgggcatgcaggtgttcggggggaagttcaacttc
cccaatgcgcccaaaccccgcagcaccttcgacagcttcccccaagctctcatcagtgtt
ttccagatcctgacgggggaggactggaactctgtgatgtatgatggcatcatggcacat
ggcggtcccaccatgcccgggatcctcgtcagcatctacttcatcatcctcttcgtctgc
ggaaactacatcctgctgaatgtgttcctggccatcgctgtggacaacctggcggaggcg
gagagtctgaccatggctcagaaggagaagtctgaggagaagaaacgcaagaagctgctc
agggctaacatgcctgacaaggccacagaggagaaagccctcctggccaagaagcttgca
gcggagagagccaaaatagagggcatccctaccacagccaagctgagagtggacgagttt
gagtccaacgtgaatgagatcaaggaccccttcccccctgctgacttccctggtgatgat
gaggaggaggagcctgatatccctgacaccccgaggccacggccaatggcagacctgcag
ctgaaggaggaggtggtgcctattccagaggccagctccttctatatctttagctctgat
aacaagatccgtaagctgtgccaccgcatcatcaacgccaccgccttcaccaatatcatc
ctcctcttcatcctcctcagcagcatctcactggctgccgaggaccccatcgaccccatg
tccttcaggaaccaggtgctggcctccgctgatgtggtcttcacctcagtgttcactgtg
gaagttgtcctcaagatgaccgtatacggcgccatcatgcaccccggctccttctgccgg
aactcctttaatatcctggatctgattgtggtcagcgtatccctcctctccatgctcatg
gagtccagtgctatctctgtggtgaagatcctcagggtgttgagggtgctgaggccccta
agggccatcaacagggccaaaggcctgaagcatgtggtccagtgtgtttttgtggccatc
aaaaccattggcaacatcgtgctggtcaccctgctgctagacttcatgttcgcatgcatt
ggagtccagctcttcaagggcaaattctatgcctgcacagatcctgacaaaatgacagag
gaggagtgcaagggcaactacattaggtaccaggaaggtgccatctatccgatgaccatc
cataagagagaatggatcaacgcagagctcaactttgacaacatcctcgaaggcatgctg
gctctcttcactgtctccaccttcgagggctggccaaagttgctctacaaggccatagac
tctaacatggaggatgtgggtcccatctacaacaaccgcatcgccatctccatcttcttc
atcgtctacctcatcctcatcgctttcttcatgatgaacatcttcgtgggtttcgtcatc
gttacatttcaggagcagggagagcaggagtacaagaactgcgagctggataagaaccag
cgtgcgtgtgtcgagtacgccctgaaagcccggccgctgcgctgctacattccgaagaac
cagtatcagtacaacgtgtggtacatcgtcacctcctgctactttgagtacctgatgttt
ctgctcatcatgctgaacaccatgtgtctggggatgcagcactgtaaccagtcaacccat
gtgaccgacctgtcagacatgctgaacgtgatcttcactgtgctcttcactgtggagatg
atcctcaaactcatggccttcaaagctaagggttactttggagacccatggaacgtcttt
gactttgtcatcgtcatcggcagcgttgttgacgtcatcctgagtgaagtcgatgcagcc
ctggcctcctctggaggactatactgtctccacggctgcgctgaggtgaacccaatgcaa
gcgatagcagattctgaaaatgcccgtgtgtcaatcaccttcttccgactgttccgtgtg
atgcgtctggtgaaactgctgaaccgttctgaagggatccggaaccttctgtggaccttc
atcaagtccttacaggccctgccctacgtcgccctgctcatcctcatgctgttcttcatc
tatgctgtggttgggatgcagatatttggtaagatagcgctaatagacgggacgtacatc
aacaggaacaacaacttccagacattcccccatgctgtgctgctgctcttcaggtgtgca
acaggtgaggcatggcaggaagtaatgttggcgtgtctgtatgggaagaggtgtgaccct
aagtcagactacctgcctggggaggagatgacctgtggagccagcttcgccatcatctac
ttcatcagcttctacatgctctgtgcctttctgatcatcaacctgtttgtggcggtcatc
atggacaactttgactaccttacacgtgattggtccatcctgggtcctcatcacctggac
gagttcaggaagatctgggcagagtacgacccagaggccacggggcgtattaagcacctg
gacgtggtgactctgctgcgtaggatccagcctcctctgggttttggaaagttctgcccc
catagagtagcctgcaagagactggtgtccatgaacatgccactcaacagtgacggaacg
gtcacctttaacgctacgctgttcgcactggtcagaaccggactgaagatcaagactgaa
ggcaactttgagaaggccaatgaggagctgagggccatcatcaagaagatctggaaacgc
accagtatgaagctgctggaccaggtcatcccaccaatcggagatgatgaggtgaccgtg
gggaagttctacgcaaccttcctgatccaggactacttcaggaagttgaagaagagacag
gaggagtactatggcttccgacccaccaagaataacgccaagaacgagatacaggcaggt
ctgaggagcattgaggaggaggcggctccagagctgcagagagccatctccggagacctg
atgaacgaggaggagatggacagagccatggaggacgcagcagaggagggtatcttcagg
cgggcgggcggtctgtttgggaaccacgttgattccttcaccatggaggaaggaacccgt
aaccctaacgctacacaggtgaccagccagcggcccctgcagatgagcagatcagacgac
gtggaggctacctgttcacctgcctaccatgcaaacgaggacttcttcccctcaacgcct
aacaaaaccaacaacaacaatgtcaacaacaatgccggagaaagcttttcttatgggaca
tatgaccgggttcaggtctataccatctcaaccagcagaagttccccagacagagactgg
cagctgcagacagtagctggacccaggcaggacgctgagacccacagagagcccctcagc
ccccagcaggcccaggcccagggcccagacagcgccttcgatacacttatacaggaggtc
ttgataaacggggggttggagagcttggccagggaccctcgttttgtgtcggtgacgaaa
cgggaaatggctgaagcgttgaactttgaccctgtggacatggaaagttccgccactgag
cttatgaatggtcgcagagggagcgttgccacacttccaatcaggccccctcgcagatca
cagagaaaggccaaccaatga
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