Salvelinus fontinalis (brook trout): 129853716
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Entry
129853716 CDS
T11136
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129853716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129853716
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129853716
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
129853716
NCBI-ProteinID:
XP_055776035
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All DBs
Position
4:38064681..38068509
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AA seq
310 aa
AA seq
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MMFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEEDPSTWTDMDMRFRAFTGSGNRLDG
KKKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPQPRKTTEDEDSEFIAFSGEGQ
SLRKKGGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttccttcaacatgtttgatcacccgatcccacgggctttccaaaaccgtttc
tccactcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtcagat
gtggagaaaggaggaaaaattataatgccgccatcagcacttgatcaactaagcagactt
aacattacctaccccatgttgttcaaactgaccaacaagaactcagacagaatgacacac
tgtggtgtcttggagtttgtcgcagatgagggtatttgttacctgccacactggatgatg
cagaatctcctgctggaggaagggggcctggtccaggtggagagcgttaacctcatggtg
gcaacatattccaagttccagcctcagagcccagacttcctggatatcactaaccccaaa
gcagtgttggaaaatgccttgagaaactttgcctgcttaaccacaggagatgttattgca
attaactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggca
gtatctatcattgaatgtgatatgaatgtggactttgatgctccgctgggttacaaagaa
ccagagagacgttacaaagcaccagaggagcccacagaagaggaagaagaccccagcact
tggactgacatggacatgagattcagagccttcactggttcaggcaatcgtctggatggc
aaaaagaaaggcattgagcctagccccgtccccatcgatcccagtgacattaaaagaggg
attcctaactacgagtacaaggtcggaaggatcaccttcatcagaaactccaggcctcag
cccaggaaaacaacagaggatgaggattcagaattcatcgccttttctggtgagggacag
tcactacgcaagaaaggtggcagaaaaccttga
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