Salvelinus fontinalis (brook trout): 129855163
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Entry
129855163 CDS
T11136
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129855163
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129855163
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_LRWD1
LRRNT
Cupin_1
LRR_6
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
129855163
NCBI-ProteinID:
XP_055778512
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Position
5:13787181..13836880
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AA seq
606 aa
AA seq
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MAAVPGLGWPGLLLLLLTTVASTQSQGCPQRCECMAKLKSVACQGKRLSAFPDGISSDTR
LLDLSGNRLRWVEHGDLLSFPRLEELDLSENIITVLEPNAFSSLQSLRVLSLRGNQLKLV
PMGAFSRLTNLTTLDLSGNKIVILLDFTFQDLKSLRNLEVGDNDLVYISNKAFLGLVGLR
QLTIERCNLTSISSQSLSYLRSLVTLRLRYLSISSLEDRNFRKLGGLRGLEIDHWPFLEH
ISPHSLQGLNLSWLSITNTNITSVPTAALRSLPHLISLNLSYNPISVLESWALRDLVRLK
ELHLVNTNLMTVQPYALGGLRQIRLLNLSTNALVTLEEGAFQSVNTLETLRVDGNPLSCD
CRLLWILQRRKTLNFEGKSPVCAGPMEVQGRALSAFSDSALFDHFTCQKPKIRNRKLQPV
TAREGQVVSFVCRAEGEPTPIIFWVSPQRRRITTKSTGRVTVLPEGTLEIRYAQLTDTGT
YICIASNAGGNATYFATLTVSALPLDAALMANRTYYTGDLNETNLNDTKVFLKFTLDLKT
ILISTAMGCCLFLGVVVFCFLMLFAWSQGRGQHKNNFSVEYSFRKVDGPAASGGQGGARK
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgttccaggcctggggtggcctggcctgctactgttgctgctgactactgtg
gcctccactcagagccaaggctgtccccagcgctgtgagtgcatggccaagctcaagtct
gtggcatgccagggcaagcgcctgtctgccttccccgacggtatctcctcggacacacgt
ctgctggacctgagtgggaacaggcttcgctgggtggagcatggcgacctcctctccttc
cctcggctggaggagctggacctgagtgagaacatcatcaccgtcctggagcccaacgct
ttctccagcctgcagagcctgagggtgctgtcgctgagggggaatcagctcaaactggtc
cccatgggcgccttctcacgcctcaccaacctcaccacactggacctgagcgggaacaag
attgtcatcctgttggacttcaccttccaggacctgaaaagcctgaggaacctggaggtt
ggtgacaacgacctggtctacatctccaacaaggccttcctgggcctggtgggtctgagg
cagctcaccattgagaggtgtaacctgacctccatctccagccagtctctgtcctacctc
cgcagcctggtcactctgcgcctgcgctacctcagcatctcctccctggaggaccggaac
ttccgtaaactgggggggctgcgggggctggagatcgaccactggcctttcctggagcac
atctccccccacagcctccagggccttaatctgtcctggctgtcgatcacaaacaccaac
atcacctccgtgcccacggctgccctgcgcagcctgccccacctcatcagcctcaatctc
tcatacaaccccatctccgtgctggagtcctgggccctgagggacttggtccgtctgaag
gagctgcacctggtcaacaccaacctgatgacggtgcagccgtacgccctcggcggcctt
cggcagatccgcctgctcaacctgtccactaatgccctggtaaccctggaggagggtgcc
ttccagtccgtcaataccctggagacgctgcgtgtggatgggaaccctctgtcctgcgac
tgccgcctgctctggatcctccagcgcaggaagaccctcaactttgaagggaagtcccca
gtgtgtgcgggccccatggaggtgcagggcagggccctcagcgcattctcagactctgcc
ctcttcgaccactttacctgccagaagcccaagatacgcaacaggaagctgcagccagtg
actgccagggagggccaggtagtgtcttttgtgtgccgggcggagggtgagcccacacct
atcatcttctgggtatctccccagcgccgccggatcactaccaagagtactggacgtgtc
accgtcctacccgagggaacgctggagatccgctacgcccagctgactgacaccggcacc
tacatctgcattgccagcaatgccgggggcaatgccacctactttgccacgctgaccgtg
agcgcactgcctctggacgctgcactcatggccaaccgcacatactacacaggtgacctc
aacgagaccaatctgaacgacaccaaggtcttcctcaagttcaccttggacctcaagaca
atcctgatatccacagccatggggtgttgcttgttccttggcgtggtggtcttctgtttc
ctgatgctgtttgcatggagccagggccggggacagcacaagaataacttctcagttgag
tactctttcagaaaggtggacggccctgcagccagcggcggacaaggaggggctcgaaag
ttcaacatgaagatgatttga
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