Salvelinus fontinalis (brook trout): 129855234
Help
Entry
129855234 CDS
T11136
Symbol
lama3
Name
(RefSeq) laminin subunit alpha-3
KO
K06240
laminin, alpha 3/5
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04382
Cornified envelope formation
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129855234 (lama3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129855234 (lama3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129855234 (lama3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
Laminin_G_3
EGF_laminin
EGF_LMN_ATRN
GrpE
LOH1CR12
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
129855234
NCBI-ProteinID:
XP_055778637
LinkDB
All DBs
Position
5:complement(17459014..17478371)
Genome browser
AA seq
1740 aa
AA seq
DB search
MKMTQGTVCWFGGVWGLLLWCALFGPCTDGQRAPQRHPNCRYDYLPQNHQSGKDPWHKGH
PRIPRKYCDTSFNNQSAGAITQRCGPGYYRERTGPHRGQCVPCNCNSLSNECDEQTGRCL
NCQYNTDGDRCERCKEGYYGNAAQKTCRGCPCPFRANNFAVACLDIGANEIECLCKPGYT
GTRCERCAPDYYGNPMIYGGRCQRCHCDATSTCDHLTGKCKKPDDPGTDDQCIECDSCTQ
ALLNDLENMDDGLELLRQQLQGIGSNSSPANLNQLEGAITETKALVGRYSTTVDAQGPKV
NLLEAEVMSLDQDISLLEDKASYSLSDAENVLVKVIQTKQRAEDFIPEAQDLLMNIEDLL
QQLSEANSSVTNITVGVEEVARMMKVVQRMVKEMRQLGCSNQTVTAAREQEDAHKLLDFI
QNNMAAPLDDNQAVANETAESLMTSVSALSDLAAAVAEADNMVNRTQSLNFNSTDFLRIL
TQLRGELERKRDSVLPEMNMTKDKLKNITGLVEMMKEMKKEYEHLAAEIDGVKPNLTKRL
NDIAKAKQKEGIVVMAEEHAEELNRLAMELHMAVHNATNSSDLQHASESIRAYSSIIKAI
EEAEMEANQSKEASDKALKDVEEQGLTNRSEELKHNASSLLTEAMNAEKDLRETSAKVDN
HKQRVGQTKNKREMLRKDALAVTENLKEIQRDDIGKLIDSAKATVNAANNTVNDVTDRLN
NISLGHIRLPNVSSNIGSVLDEAGNELKKLNETWPTLEDTLSRVQNLCSQASPSVSMTDS
IRRIKDVIEEARDIVKRLSIGMTFNGKGHIELRPPTNVEDLKAFTAAELLLNRQETKPTR
GDRSRRRRQNTQDDRNLFVLYLGNKDSSKDFIGMAVKNNTLRCVYKLGGVVHELNTDHIT
RTKVNSTVFDKVVFNRVYQDAELSLTHRFPSQSVEVSKESNRPNTTVGLLNLDTNSVVFY
VGGYPDAFTPPVELRYPKYCGAIKLSTINDQFFSLYNFKNAINVDKQSYIKVSVSLQSTV
PYYFDGTGYGLVTAIKEIETPKRGVLKFHTNSQVENALLFYKGNEDSYTSVTVERGYVVL
QGRHGTQVLNAKSTRKVSLNNEQFVIVMDTTFKVHVAGVQTEIVKIDNIMEGFKHFYIGG
LPASLRERDNVTTPPFRGCIDNVILQSKEIEFNTTIGVSVGCPTSLLGVREATFHPGGSL
SVDPQDFWTTPAAMVSLGFRTMENKGVLLRTSEERHGYQLSLVDGYVMFNFDENALKSTK
TYNDGRWHYLTALRNGTQLELRVDNGDLGQHQTSPQDKPNEQQVVLGGETFRGCLANLHI
RRPEESFIPADFSSFTQKGDVILGMCRLQPPPQAIWEPASLQERPKKPKPRSGAVHTECR
LPKVSDPQAYQLTGAASWLSYIIAPEELNFRPHLSLEIRTRSSEGLLLHVSGNGDISQVS
LYMTNGKIKLSLGKDRVIHNKKKSNDGRWHTVMVSVEKNTFHLVVDGFRVPDGILPAEEG
SSLALQNPVYLGSDPASKTSWGQGGSLPKKSVIGCIRHFKVYNVLVGEPAANHGAPPCFD
GATETGAYFAGTGHVVLDKFFTVGSRFELTFEARPRNTTGLLFHARGRHRNSLSVFMRKN
KVEVHVNDGLGDYSASVTPQQNLCDGTFHVIAVSKQNNVVQLNVDSESQRTVGPSHSSYT
MTKDSLYIGGMSGTSKHKGVPVSSSFVGCLRNIKVNKKPVVFKTASSVVGPVNVNECPAD
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacacaagggactgtttgctggtttggaggagtatggggattattgttgtgg
tgtgctttatttggcccctgcacagatggccagagagcaccacagagacatccaaactgt
aggtatgactatctgcctcagaaccaccagagtggtaaggatccttggcacaaagggcac
cccaggatccctaggaagtactgtgacacctcattcaacaaccagtcagctggagccatc
acccagaggtgtggccctggatactacagagagaggacagggcctcataggggccagtgt
gtaccctgcaactgtaacagcctgtctaatgaatgtgacgagcaaacagggagatgtctg
aactgtcagtacaatactgatggggatcgatgtgagcgctgcaaggaaggttactacggc
aatgctgcccaaaagacctgtcgtgggtgtccatgtcccttcagagccaacaattttgca
gtagcatgtctggatattggtgcaaatgaaatcgaatgtttgtgcaaacctggctacact
ggaaccagatgtgagaggtgtgccccagattactatggtaacccaatgatatatggaggc
aggtgccagcgatgccactgtgatgctaccagtacctgtgaccatctgactggaaagtgt
aagaagcctgatgatcccggcacagatgaccaatgcatagagtgtgacagctgtactcag
gccttactgaatgatttggaaaatatggatgatgggctggaattgctaaggcagcagctt
cagggcattggctccaacagctcaccagccaaccttaaccagctggaaggtgccattact
gaaacaaaggctctggttggaaggtacagcactactgtggatgctcagggcccaaaggtc
aatctgctggaagcagaagttatgagtctggatcaggacataagcctactggaagacaag
gcaagttactctctctcagatgctgagaatgtcttggtgaaagtgatccaaaccaaacag
agagccgaggattttatccctgaagctcaagatcttctaatgaatatagaagatctcctt
caacagcttagtgaggctaattctagtgtaaccaacatcactgtgggagtggaggaggta
gccaggatgatgaaggtggtgcagcgcatggtgaaggagatgagacagcttggctgcagt
aaccagacagtgacggctgccagggagcaagaggacgctcacaaactcttggacttcatc
cagaacaatatggcagctccattagacgacaaccaggctgtagccaatgagacggcagag
tccctgatgacgtcggtctctgcgttgagtgatctggccgcggctgtggcagaagcagac
aatatggttaacaggacacagagcctcaacttcaacagtactgatttcctaagaatcctg
acgcaattaagaggtgagctggagaggaaacgtgattcagtgcttcctgaaatgaatatg
accaaagataaactgaagaatatcacaggccttgtggaaatgatgaaggagatgaaaaag
gaatacgagcaccttgcagccgagatagacggagtcaagcccaatctaaccaagaggctg
aatgatatcgctaaagcaaaacagaaggagggcattgtcgtcatggcagaggagcatgca
gaggaactgaacagactggcaatggaactacacatggcagtgcataatgccaccaacagc
tctgacctgcagcatgcttcagaaagcatcagagcctacagcagcatcataaaagccatt
gaagaggcagagatggaggccaaccaatccaaagaggcatccgacaaagctctgaaggat
gtggaggagcaaggtctgaccaacaggtctgaggaactaaagcataatgcaagtagctta
ctgacagaggccatgaatgctgagaaggacctcagagagacctcagccaaagttgacaac
cacaagcaacgtgttggtcagaccaagaacaaaagagagatgctgagaaaagatgctctt
gcagttacagagaatcttaaagagattcaaagagatgacattgggaagctcatagactct
gccaaagcaactgtcaacgctgccaataacacagtcaatgacgtaacagacagactaaat
aatatcagcttgggacatataaggcttcctaatgtcagttcaaacattggcagtgtgctc
gatgaggctggcaatgaattgaagaaattgaacgagacatggcctactttggaagacacc
ctcagcagggtgcaaaacctgtgctcccaggcttcccctagtgtcagtatgacagacagc
atcaggagaatcaaggacgtgatagaggaggccagagacattgtcaaaaggctctctatc
ggcatgaccttcaatgggaagggtcacattgagctccgcccccccaccaatgttgaggat
ttgaaggcgtttacagctgctgaacttcttctcaaccgccaggagaccaagcccactagg
ggggaccgcagccgtaggcgcagacagaacacacaggatgacagaaacctctttgtgctc
tatctcggcaacaaggactcatccaaagacttcattggaatggctgtaaagaataacact
ctccgctgtgtatacaagctgggtggagtcgtacatgagttgaacaccgaccacataacc
agaaccaaagtgaactccactgtttttgacaaggtcgtctttaacagagtttaccaagat
gctgagctcagtctcacacacaggttcccatcacagtctgtcgaagtttctaaggagagt
aaccggcccaacacgacagtcggcctcctcaacctggacaccaacagtgtggtcttctac
gtaggcggttatcctgatgccttcactcctccagtggagctgcgctaccccaaatactgt
ggagccatcaaactttctactatcaatgatcaattctttagtctgtacaacttcaagaat
gccatcaacgtagacaaacagtcctatataaaggttagtgttagtctacagtcaacagtg
ccttattattttgacggcactggttacggtttggttacggccattaaagaaattgaaacc
ccgaaaagaggagtgctcaagttccacacaaacagccaggtggagaatgcattactgttt
tataaaggaaatgaggattcgtacactagtgttactgtggagagaggttatgttgtgctg
cagggaagacacggcacccaagtcctcaatgccaagagtactagaaaagtttcactcaat
aatgaacaatttgtaatagtcatggatacaacatttaaagtacatgtggctggagtacaa
actgagattgtcaaaatagacaacatcatggaaggtttcaaacatttctacattgggggt
ctaccagcgtcattaagagaaagagataatgtcacaaccccaccattcagaggatgtata
gataatgtgattttacaatctaaggagattgagtttaacacgacaattggtgtcagtgtt
ggatgcccaacctcgcttttgggtgttcgtgaagctactttccaccctggtggctccctc
tcagtggacccacaggatttctggactacccctgcggccatggtttctttggggttcagg
accatggagaataaaggtgttcttctcaggaccagcgaagagcgtcatggataccagctc
tcattggttgatggctatgtgatgtttaactttgatgaaaatgccttgaagtctaccaag
acatacaacgatggaagatggcactacttgactgcattaaggaatggcacacaattggag
ttgagggttgataacggtgatttgggtcagcatcaaacctccccccaagacaagcccaat
gaacagcaggttgtgttgggaggagagaccttcaggggctgcctggctaaccttcatatc
aggaggcctgaagaaagctttattcctgctgacttcagctcgttcacccagaagggagat
gtgatcctggggatgtgcagactacagccccctcctcaggccatatgggagccagcaagc
cttcaagagaggcccaagaaacccaaaccaagatctggtgctgtgcatactgagtgcaga
ctgcccaaagtgtctgacccccaggcataccagctaactggggctgctagttggctcagt
tacatcatcgcacctgaagaacttaatttcaggcctcacttgtccctggagatcagaacc
aggtcatctgaggggctgttgctccatgtctcagggaacggggacatctcccaagtctct
ctgtacatgaccaacggcaagatcaaactctcactggggaaggacagagtcatccacaac
aagaaaaagagcaacgatggaagatggcatacagtaatggtcagtgtggagaagaacact
ttccacctggtcgtggatggtttccgtgtgcctgatggtattctacctgcagaggagggt
tcctccttagccctgcagaacccggtctatctgggcagtgaccctgcctccaaaacctct
tggggtcagggtggctctcttcccaagaagagtgtgattggctgtatacgccatttcaaa
gtgtacaatgttctggttggtgaaccagccgccaatcacggggccccgccctgctttgat
ggggcaacagagacgggggcatactttgctggcacagggcatgtggtcttagataagttc
tttactgtgggctcccgttttgagctgacctttgaggctcgcccacggaacactacaggc
ctcctcttccatgccaggggtcgtcataggaacagcttaagtgtcttcatgaggaaaaac
aaggtggaggtccacgtgaatgatgggttaggtgactacagtgcatctgtgacacctcaa
caaaacctgtgtgatggcacattccatgttattgcagtgtccaaacagaacaatgtagtc
caactgaacgtggactcagagtctcagcgtacggtcgggccttcccactcctcctacaca
atgactaaggattccctctacattggtggcatgtccggcacatcaaagcataaaggagtg
ccagtctcttcttcgtttgttggctgcttgcggaacataaaggtcaataaaaagcctgtt
gtttttaagacagcctccagtgtggtcggccctgtgaacgtcaatgaatgcccagcagac
taa
DBGET
integrated database retrieval system
