Salvelinus fontinalis (brook trout): 129857976
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Entry
129857976 CDS
T11136
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129857976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129857976
03012 Translation factors [BR:
sfon03012
]
129857976
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129857976
Translation factors [BR:
sfon03012
]
Eukaryotic type
Release factors
129857976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
129857976
NCBI-ProteinID:
XP_055782758
LinkDB
All DBs
Position
6:complement(48467550..48475901)
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AA seq
443 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLYVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKILKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYILRLHGAESIGTENDEKTLYLTPEQEKDK
SHFTDKETGQDHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGCLR
YRVDFQAIDYQAEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccctaacgcagcggacaggaacgtggagatatggaaaatcaagaagttg
attaaaagtttggaagctgcccgaggtaatggaaccagtatgatctcgctgatcattccc
ccgaaggaccagatctccagagtggccaagatgttggctgatgagtttgggacagcctcc
aacatcaagagcagagtcaacaggctctctgtgctcggggccattacctctgtacagcag
agactaaagctatacaataaggtgccccctaacggcctggtggtctactgtgggaccatt
gtgacagatgagggcaaagagaagaaagtcaacatagactttgagccttttaaacccatc
aacacctctctgtacctctgtgacaacaagttccacactgaggcgctgacggccctgctg
tccgatgacagtaagtttggtttcatagtgattgatggtagcggggctctcttcgggaca
ctccaggggaacaccagagaggtgctgcacaagttcaccgtggacctgcccaaaaaacac
ggcagaggaggtcagtctgctctgcggtttgcccgtctgaggatggagaagaggcacaac
tatgtgaggaaggtggctgagacagccgtccagctctatgtgtccaacgacaaggtcaac
gtggccggaatggtcctagcagggtctgccgacttcaagaccgagctcagccagtccgac
atgtttgaccctaggttacaggcgaagattctgaagctggtggacatctcgtacggagga
gagaacggcttcaaccaggccatcgagctgtcggcagaggtcctctccaacgtcaagttc
atccaggaaaagaagctcatagggcggtactttgatgagatcagtcaggacacagggaag
tactgttttggcgtggaggacacactcaaagccctggagatgggagctgtggagattctc
atcgtctatgagaacctggacaccatgcgttacatccttcgcctgcacggggccgagagc
atcggaacagagaacgatgagaagactctgtatttaacaccagagcaggagaaagacaag
tcccacttcacagataaggagactgggcaggaccacgagctgattgagagcatgcctctg
ctggagtggttcgccaacaactacaagaagtttggagccacgctggagatcgtcacagac
aagagtcaagaaggctcccagtttgtcaagggcttcggaggcatcgggggatgcttgcgg
tacagggtggatttccaggccatagattaccaggcagaggacgatgagtttttcgattta
gatgactactag
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