Salvelinus fontinalis (brook trout): 129858248
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Entry
129858248 CDS
T11136
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04517
IgSF CAM signaling
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129858248
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129858248
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129858248
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129858248
NCBI-ProteinID:
XP_055783311
LinkDB
All DBs
Position
6:complement(61501691..61642685)
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AA seq
1674 aa
AA seq
DB search
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRIMCETVRYERHEA
NEVLYYPDDVGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMEENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPTGKPPIVRGYHTLPADF
SRLHLADGLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATENEPGDMDLSGLPETAVDS
EEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRPEILCMGNSFGVSPTI
EKEYMKGVMKTKMDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTKERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGNKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDPAMTHFLEEFENNLEREVRVSKMYGHLRLLNIACAAKA
KLRLVTLTKPSREAPLAFTLLGGSEKGFRIFIDSVEPGSKAAEAGLKRGDQILEVNGQNF
ENVQLTKANEILRNNTHLSISVKTNLLVFKELLARPEHHHEAEGEEPPEVDRKNGAPAHL
PKIGDIKKGSRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPK
PYNDVGVGQSQDDSIVGLKQSKQIPAALPVSGSLSSSNPDLLQSHHRILDFNNQPAPVVT
NMSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPDAYSLCEVSITPEGVI
KQRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQISLLQLSTMEVAT
QLSMRAFELFCAIEPTEYIDDLFKLKSKTGSFCLKRFEEIINQETFWVASEVTREPNQLK
RMKTVKHFIKIALHCRECKNFNSMFSIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDL
FDPSRNMAKYRNVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARRVKQFLSNLSLETNEEALQTLSLQCEPSINTLPKNAGGSKRPDTSPVV
SRAASQQRGQLQKGNQALQVPAVALYPSRKKVPVKDLPPFGTSSPQSLKKILSLSEEASK
RQTEDTVSNTCSQLSSPPTSPQSSPKKGLGTLKGQSVRKVTFTSKQTATGYPRTGDAYSD
SGHSEISSRSSLVSNSSFDMAQEERRGLRHSGGVGDPHAGGVRLERRATTDPDQYSLGSY
SSMQDCRGLYTCATVLSPSSEELTQDQGDRVSLDAADSGRGSWTSCSSGSHDNIQTMQQG
RSWETLAFGPGGVVSVGVHPPGGPETFIGVPSGLWASHARGSWASASSSSSAAYWGEDSE
GDTGTIKRRGGKDVNADPETSSITSMGSDEAKQHGRPSPITAGNKGLITRKESRYREPPP
TPPGYTALTISDFSEGQTQSPPPSTAPSHSGRRPPDYSTALQRSRMVTQSPDSQHHHQAK
QHPGSGTTKRHGLHRTRSPDEDEEPEEEEGESLSPKLVALRKTVAHTTPETTRP
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagttttcgtcaagctgtgatgatgaatccggcggaaaga
acgcaacaggacctggaaatagtctactcctatctgcatgggatggaggccctgtcgaac
ctcagagaacaccagctgaggataatgtgtgagacagtgcgttatgaaagacacgaagcc
aatgaagtgctctattacccggatgacgtcggaagctgctggtatatcctactgtccggg
tccgtcttcatcaaggagtccatgttcctgccaagaagcagttttggaaagcgttctgca
gggagcctgagacgtggatgtgagtgcatcgttctggaaccttcggagatgattgtggtg
gactatatggaggaaaatgaggagtacttccagaggcaagcatcacatcgacagtcccgc
cgcaggttccgcaagatcaaccagaaaggcgagcggcagactatcatcgacacggtggac
ccgtaccccaccggcaagccgcccatagtcaggggatatcacacgctccccgcagacttc
agccgactccacctggccgacggcttgcacccacaggtgacccacgtgtcttccagccac
tcaggatgtagtatcaccagcgactctggaagcagcagcctgtcagacatatatcaggcc
acggaaaacgagccaggcgacatggacctcagcggcctgcctgagaccgccgtcgactca
gaggaggacgatgacgaggaggacatcgagcgagcgtcggaccccctcatgagccgtgac
atcgtgcgggactgcctggagaaggacccaatggaccgcaccgatgacgacatagagcaa
ttactggagttcatgcatcagctgccagcgtttgccaacatgaccatgtctgtgaggagg
gagctgtgtgccgtcatggtgtttgccgtggtcgagcgggccggcaccatcgtactcaat
gacggggaagagctggactcgtggtcagtgatcctgaatggctcagtggaggtgacgtac
cctgagggcaggcctgagatcctgtgtatgggcaacagcttcggggtctcccccaccata
gagaaggagtacatgaagggagtgatgaagactaagatggacgactgtcagtttgtgtgc
atagcgcagcaggactactgctgcatcctcaaccaggtggagaagaacatgcagaaggtg
gaggaggagggcgagatcgtcatggtcaaggagcaccgtgagctggaccgcaccggcacc
cggaagggacacatcgtcatcaagggcacgaaggagcgtctgactatgcacctggtagag
gagcactctgtggtggaccccacctacatcgaggatttcctgttgacctacaggactttc
ctctccagccccatggtcgtgggcaacaagctcctcgagtggttccacgacccaagcctc
agggacaaggttacacgggtagtcttgttgtgggtgaacaatcacttcaatgactttgaa
ggcgaccctgcaatgactcactttcttgaagagtttgagaacaatctggagagagaggtc
cgtgtctcaaaaatgtacggccaccttagactgttaaacattgcctgcgctgctaaagcc
aaactgcgactagtgacactgaccaagccgtccagggaggccccgctagccttcaccctg
ctggggggctccgagaagggcttccgcatcttcatcgacagcgtggagcccggtagcaag
gccgcggaggccggccttaaacgaggagaccagattctggaggtgaatgggcagaacttt
gagaatgtccagctcacgaaagccaatgagatcctgaggaataacacccacttgtcaatt
tctgtgaaaactaatcttttagtgttcaaggagctcctagcccgaccagagcaccaccac
gaggcagagggtgaggagccgccagaggtggaccgcaagaatggcgccccggcacacctg
cccaagatcggggatatcaagaagggctcgcgctactccatccctgacctggcggtggat
gttgagcaggtgatgggcctggagaaggccagcaagaaggccaaagccaacacggtgggg
ggaagaaacaagctcaagaagatctttgacaagacgctcaccagcatcctgcccccaaaa
ccatacaacgacgtgggtgtgggccagtcgcaggacgacagcatcgtgggcctgaagcag
tccaaacagattccggccgcgctgccagtcagcggcagcctgtcgtccagcaaccctgac
ctgctgcagtcccaccaccgcatcctggacttcaacaaccagcctgccccagtcgtgaca
aacatgtcagaccaggtgctgcgggtgttcaaggcagaccagcaaagtcgatacatcatg
atcggtaaggacaccacggccaaagaggtggtggcacaggccatccgggagttcgccctg
accgcagcgcccgacgcctattccctgtgtgaggtgtccatcacgccggaaggcgtcatc
aagcaacgccggctaccggagcaactgtccaagctggcagacaggatacagctcagtggc
agatactacctgaagagcaacatggagacagagaccctctgttcagacgaggacgcccag
gacctccttcgtgaaggccagatctccctcctccagctgtccaccatggaagtagccacg
cagctctccatgcgcgccttcgaactcttctgcgccatcgagcccaccgagtacatcgac
gacctgttcaagctcaagtccaagacgggctcgttttgcctcaagcgcttcgaggagatc
atcaaccaagagaccttctgggtggcgtcggaggtgacccgggagcccaaccagctcaag
cgcatgaagacggtcaagcatttcatcaagatagctctccattgtagagagtgcaagaac
ttcaactccatgttctccatcattagtggtctgaacctggccccagtatctagactccgg
ggcacgtgggagaagctgcccagtaagtacgagaagctgtttggggacctgcaagacctg
tttgatccatccaggaacatggccaagtatcgcaacgtgctcaacaaccagaacctccag
ccacccatcatccccctgttccccgtcatcaagaaggacctcaccttcctgcacgaaggg
aacgactctaaagtggatggcctggtgaactttgagaagctgcggatgatcgccaaagag
atccgccacgtgggccgcatggcctccgtcaacatggacccagcgctcatgttcagaacc
aggaagaagaaatggaggagtttaggttctcttagccagggcagtgccaatgcggcggtg
ctagacgtcacccagacaggcgggcacaagaagcgggtgaggcgcagctccttcctgaac
gccaagaagctgtatgaggatgcccagatggcccgcagggtcaagcagttcctgtccaac
ctcagcctggagaccaacgaagaggcgctgcagaccctctcgctgcagtgtgagccctcc
atcaacacactgcccaagaatgctggtggcagtaagaggccagacacgtctccggtggtg
tccagggctgccagccagcagaggggccagctgcagaagggcaaccaggccctccaggtg
cctgctgtggccctctacccctcacgcaagaaagtacccgtcaaggacctgccaccattc
ggcacgagttcccctcagtcgttgaagaagatcctgtcactgtcagaggaggccagcaag
cgtcagactgaggacactgtatccaacacctgctcgcagctctcctccccgcccacctca
ccacagagctcacctaagaaggggctcgggacactgaagggccaaagtgtccggaaggtt
acctttaccagtaaacagacagccacaggctaccccagaacaggagatgcctactcagac
tccggtcacagtgagatctcatcgcgctccagcctggtcagcaactcctcctttgacatg
gcccaggaggagaggagggggctcagacactccggaggggtgggagacccccacgctgga
ggggtgcgtctggagaggagggctacgacagacccggatcagtacagcctcggttcctac
tcgtccatgcaggactgccggggtctgtatacctgtgccacggtgctatctcccagctcc
gaagagctgacccaggaccaaggggaccgtgtctccctggatgctgcagacagtggccgc
ggctcctggacctcgtgctcctcgggctcccacgacaacatccagaccatgcagcaggga
cgcagctgggagaccctggccttcgggccgggtggtgtggtcagcgtgggtgtccatcct
cccggggggcctgaaacatttataggggtcccctctggactgtgggcgtctcacgctaga
gggagctgggcatcggcctcttcatcttcctctgcagcgtactggggcgaggactcggag
ggtgacacgggcacgattaaacgtcgaggcgggaaagacgtgaacgctgacccagagaca
agtagtatcacatccatggggtctgacgaggccaagcagcacgggaggccatcgcccatc
accgctggcaacaagggtcttatcacacgaaaggagagccggtaccgcgagccccctccc
accccgccgggctacaccgccctgacaatctctgacttcagtgagggccagacacagtcg
ccacccccgtccacggccccgtcccactctggccgccgcccacctgactactccacagcc
ctgcagcgctcgcgcatggtcacccagtcgcccgactcccagcatcaccaccaggccaaa
caacacccaggttccggaaccacaaagcgccatgggctccaccgcacccgctcgccagac
gaggatgaagagccggaggaggaagagggtgagtccttgtctcccaaactagtcgctctg
aggaagacagtggcacacacaacaccagagacaaccaggccctga
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