Salvelinus fontinalis (brook trout): 129859673
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Entry
129859673 CDS
T11136
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129859673
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129859673
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Paralog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Zip
Motif
Other DBs
NCBI-GeneID:
129859673
NCBI-ProteinID:
XP_055785707
LinkDB
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Position
7:53143058..53181691
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AA seq
2027 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRITEEEARKPRVDRCSDSNDDNEPKPNSDLEAGK
SLPFIYGDVPEGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTTTDDRLNRTLGTPD
VNGTHFNGTDFNITSSVNWTEYINNESNYYYLPNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYDYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAVAAATESHGEYSER
GGPSTEASSGTSKLSSKSAKERMNHQKKRKERGEHKKFHKSESEDSTKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDVVSDNDFADDEQSTFEDTD
SRRGSLFVPCRIERRSSMVSQTSLAPQRVLLPSNGKMHCTVDCNGVVSLVGGTSVPTSPV
GLLLPERTTTDSEMRLKKRRSRQASMSYLDEPDRARARAMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTK
EFNHVLSVGNLVFTGIFTAEMGFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYKECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVAIRQVI
QSLFLGGGATKGVKGGSLEGGKTLDELHSSINGKGDNCNSKHMLVEITKDPSGVYLKEGN
GRPGGGLGVGLGDSTENYPKEEYNYMSFIHNPSLTVSVPIAVCESDFETTITEDFSSESA
SEEMSMGSKEKLPIEPQHLISSEGSSVDIGPPGDGAESVELEDEESEDPENCFTDGCVLR
FQCFQVNVEEGKWKMWWTLRKTCFIIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTI
KIVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYYCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFITKQAFDIVIMIL
ICLNMVTMMVEEDDQTPEREKILHWINFVFIVLFTGECMLKMISLRHYYFTIGWNVFDFV
VVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFS
VATEESAEPLSEDDFEMFYEVWERFDPDATQFVEYHKLSDFADALDPPLRMAKPNHIQLI
KMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTL
RRKQEEMSALVIQRSFRRYLARLALKKAAELYKKQPKGSVMYELEDKEVLVIGQSADNST
LTEKTDMTPSTASLPSYNSATNLEKDQYAKEKREKENRDKDLREQNK
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcatcactgaggaggaggcccggaaaccccgcgttgaccgc
tgtagcgacagcaatgacgacaacgagcccaagcccaacagcgacctggaggcggggaag
tccctccccttcatctacggggacgtcccagaaggctttgtctccacccctctggaggac
ctggaccccttctactccaatcagaaaacatttatagtattgaatcgcggcaaggcaata
ttccgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctcc
atggcgtatgtaacagagtttgtaaacctaggcaatgtttcagctctgcgcactttcaga
gtattgcgagcattgaaaactatctcggtaatcccaggactaaagaccatcgtgggcgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctgcagctcttcatgggcaacctgaggcagaagtgtatccgc
aacctcgtcaatgacacgaccaccgacgaccgcctgaacagaactctgggaactccagac
gtaaatggaacccatttcaatggaaccgatttcaacatcactagctccgtgaactggact
gagtacatcaacaatgagagtaattactattacctccccaaccgcagggacgccctcctc
tgtgggaatggcagtggagccgggttgtgcccagagggattcacgtgcatcaaggcgggc
aggaacccagactacgactacacaagcttcgactcatttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
gggaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggtggccatggcctacgatgagcagaaccaggccaccatagag
gaggcagcccagaaggaggaggagttccaggctatgctggagcagctcaagagacagcag
gaggaggcattggttgccgtggcagcagccacagagagccacggagagtacagcgagaga
ggggggccctccacagaagcctcctcagggacctccaaactcagctccaagagcgccaag
gagagaatgaaccatcagaagaagagaaaagagaggggcgagcacaagaagttccacaag
tccgagtcggaggacagtaccaagaggttaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccgagctagcctgtttagcttccgaggccgcgcccgc
gatgtggtctccgataacgacttcgccgatgacgagcaaagcacgttcgaggacaccgac
agccgccgcggctccctgttcgtgccttgccgtatcgagcgccgctccagcatggtgagt
cagactagcctggcccctcagcgcgtcctgctgccctccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgta
ggactgctcctgcctgagaggacaaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatgtcctacctagatgagccagacagagccagagccagagctatg
agtgtggccagtattctcaccaacaccatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagtttcaaggggatcgtcaacacagtggtgatggaccccttcgtggacctggccatc
accgtctgtatcgtcctcaacaccctcttcatggccatggaacattatcccatgaccaag
gagttcaatcatgtcctctctgtcgggaacttggtgtttacaggcatcttcacggctgag
atgggtttcaagctaatcgctctggacccctactactactttcaacagggatggaacata
tttgacggcatcatcgtcagtctgagtctgatggaactcggtctggccaatgtagagggc
ctgtctgtgctccggtctttccgattgttgagggtgttcaagctggccaagtcttggccc
accctgaacatgctgatcaagatcatcggtaactcggtgggagcgctgggtaatttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgtgtgtgtaagatcgcagacaactgccagctgccgcgctggcacatg
catgacttcttccactcgttcctcatcgtgttccgggtgctgtgtggggagtggatcgag
accatgtgggactgtatggaggtggctggccagagcatgtgcctcatcgtttttatgatg
gtcatggttatagggaacctggtggtcctgaatctgttcctggccttgctgctcagctcc
ttcagcgccgacaacctggcggccacggacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcatccagaggggcgtggcctgggtcaaggtggccatccgccaggttatc
cagagcctgttcctcgggggcggagccaccaaaggggtcaagggggggtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaagggggacaactgcaactca
aaacacatgttggtcgagatcactaaagatccgagtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggttaggagacagtacggagaattacccaaag
gaagagtacaactacatgtcgttcatccacaaccccagcctgacggtgagcgtgcccatc
gcggtgtgcgagtcggactttgagaccactatcacggaggacttcagcagcgagtcggcc
tccgaggaaatgtcgatgggcagcaaagagaagctacctatagagccccagcaccttatc
tcatcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtggag
ctggaggacgaggagtcagaggacccagagaactgcttcaccgatggctgtgtgctcagg
ttccagtgtttccaggtgaacgttgaggagggcaagtggaagatgtggtggaccttgagg
aagacgtgcttcatcatcgtggaacacaactggttcgagaccttaatcattttcatgatc
ctgctcagcagtggcgctctggcgtttgaagacatttacatagaacagcggaagaccatt
aaaattgtgctggagtacgcagacaaagtcttcacctatatcttcatcctggagatgctg
ctgaagtgggtggcctatggattcaagaagtacttcaccaacgcctggtgttggctggac
ttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggctactctgag
ctgagtgccattaaatccctacgaacactgcgagccttaagacccctgagggccttgtca
cggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccgtccatcatg
aacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaacctg
ttcgcagggaagtactactactgcgtcaacaccaccaacgacgagacctttcccatcgag
gtggtcaacaacaagagcgactgtctggccctggccaatgacagcgcccgatggaagaat
gtcaagatcaactttgataatgtcggggccgggtacttggccttgttgcaagtggcaacg
tttaaaggttggatggacatcatgtatgcagctgtggactctcgtaatgtggaacttcag
ccccaatatgaacagaacctctacatgtatctgtactttgtcatcttcatcatctttggc
tccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaag
aaaaagtttggaggtcaggacatcttcatgacagaggaacaaaagaaatactacaatgcc
atgaagaagctcggctccaagaaaccccagaagcctattcccaggccaacgaatgcattc
caaggctgtgtgtttgacttcataacgaagcaggcttttgacattgtcatcatgatcctc
atctgcctcaacatggtcactatgatggtggaagaggacgaccagacaccagagagggaa
aaaatcctccactggattaactttgtctttatagtgctctttactggggagtgtatgctc
aaaatgatatccctccgccattactacttcacaattggctggaacgtgtttgactttgtc
gttgtcatactttcaatcgtaggtatgtttttatcagaattgattgagaagtactttgtt
tccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctccgtctcatc
aagggcgctaagggcatccggacgcttttgttcgccttgatgatgtcacttcctgccctg
tttaacattggcctcctgctcttcctggtcatgttcatctacgccatcttcggcatgtcc
aacttcgcctacgtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggacggcctcctg
gcgcccatcctcaacaagaaggagcccgactgtgacagccagatggagcacccgggcacc
ttgtaccggggaaactgcggcaacccgccagtggccatgttcttcttcgtcagctacatc
atcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctcgagaacttcagc
gtggccaccgaggagtcggccgagccgctgagcgaggacgactttgagatgttctacgag
gtgtgggagcgcttcgacccggacgccacgcagttcgtggagtaccacaagctgtcggac
tttgcagacgcgttggacccgccgctgcgaatggccaagcccaaccacatccagctgatc
aaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatcctgtttgcc
ttcaccaagcgtgtcctgggagagggtgaaggcttggacctcctccggggccagatggag
gagcgcttcatggcctccaacccctccaaagtctcctatgaacccatcaccagtaccctg
cggcgcaaacaggaagaaatgtctgccttggtgatccagaggtcattcaggcgctacctg
gcccgactcgctctgaagaaagcagcagagctctacaagaagcagcctaaaggcagtgtg
atgtatgagctggaggacaaggaggtgctggtgataggacagtccgcggacaactccacc
ctcactgagaaaacggacatgacgccctccaccgcctcgctgccttcgtacaacagtgcc
acaaatttggaaaaggaccaatatgcgaaagaaaagagggagaaagagaacagagacaaa
gatctgagagagcaaaataaataa
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