Salvelinus fontinalis (brook trout): 129861818
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Entry
129861818 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129861818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129861818
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129861818
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
129861818
NCBI-ProteinID:
XP_055788941
LinkDB
All DBs
Position
9:complement(30417907..30443296)
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AA seq
979 aa
AA seq
DB search
MSQSQQLHRWRMLRLRQAGGHPSQRASREAEGIAMATMEERMTQGCVDLVQMAEEVARHT
AETAFRQMQDAQFIKLSIQSQEAILDRCQVCPAEEDPVESAESAPQSEPREAASPDIEPE
PQEEPEHQRASPSPRSSPEPEQFRQEPEPKPKAQNAKVAPEPVTQQPPEPVTQSKEAEDC
NKPDTTTKEEGKTVEEGECGMSSRLSVHPAVNVEDVDSGREGGGDGGEHHHHHIPQILTL
QDPNFKTLTVPGVSKTSRQSKVAEKDEKKPKNIWTNIKKVYSQSEEEEEEMEFAVRAWPS
QSSILSGDDGLKERPASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPT
ASPARAPTPSPAPPEEPKEEEIEEQQPKPRLCCKVTPPRWIRALLHYRFPASIDPFTNLV
YVLWLFFVTLAWNWNMWLIPVRWAFPYQNPSNIYLWLLTDYLCDLIYILDILVFQPRLQF
VRSGDIVFDKKDMRVNYMKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKIMSFFEF
NDRLEGILTKAYVYRVIRTTTYLLYCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIRC
YYFAVKTLITIGGLPDPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRA
CMDNTVKYMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYD
IVSKVSLFQGCDRQMIFDMLKRLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDG
KTVFVTLRAGSVFGEISLLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKL
LRKKARKMLTKDKKPPKEPAQVIPPRMVTPKLFKAALDVAHQKTGLKGTLAKIKENINKS
SVSLQPSMSSSLPPLSPVSPVSSLDPEREANAMSPTIDSSTLLCPVSHCHGDETLSKEQG
QVAGEVAGESGKKKEKRKA
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagagtcaacaactccatcgctggaggatgctgagactccgacaggcaggtgga
cacccttcacagagagcatcaagagaggctgagggcatagctatggctaccatggaggaa
cggatgacccagggctgcgtggatttggtgcaaatggcggaggaggtggccagacacaca
gctgagacggccttcaggcagatgcaagatgcccaatttatcaaactgtccattcaaagc
caggaagccattctggataggtgccaggtgtgtcctgctgaggaggacccagtggagtca
gcagagagtgcccctcagtcagagcccagagaggctgcatcacccgacattgaaccagaa
ccccaggaggagccagagcaccagagggcctctccatcccctcgttcaagcccagagcca
gagcaattcagacaggagcctgaacctaaaccaaaggcccagaacgccaaagtagcacct
gaaccggtgacccaacaaccacctgaaccggtgacccaaagcaaggaggcagaggactgc
aacaaacctgacaccactaccaaggaggaggggaagactgtagaggagggcgaatgtggt
atgagctccaggctcagtgtgcacccagctgtcaatgtggaggatgtggattcaggcaga
gagggaggaggggatggaggggagcaccaccaccaccacattccccaaatccttacccta
caggaccccaactttaagaccctgaccgtacccggagtgtccaaaaccagccgtcagagt
aaagttgctgaaaaagatgagaagaaacccaagaatatctggaccaatataaagaaggtg
tactctcagagtgaggaggaagaagaggagatggagttcgcagtgagggcatggcctagc
cagtccagcatcctcagtggagacgatgggctaaaggagcgccctgcgtcgtccgctagc
caggccagctacgtggtgaacgagcgcctacaggagctggtcaagatgtttaaggagagg
acagaaagggccaaagagaaactcatagacccagatcactctgatgatgacagtccaact
gcctcccctgcaagagctccaacaccatctcctgcacctccagaggagccgaaggaggag
gagatagaggagcagcaacccaagcctagattatgctgcaaggtgacgcctcctcgctgg
atcagagctttgctgcactaccgcttccccgctagcatcgaccccttcaccaatctggtc
tatgtgctgtggctgtttttcgtcaccttggcgtggaactggaacatgtggcttatcccg
gtgcgctgggccttcccctaccagaaccccagtaacatctacctgtggctactcactgac
tatctatgtgacctcatctacatcctggacatactggtcttccagccccgcctgcagttt
gtccgcagtggagacatagtgtttgacaaaaaggacatgagagtgaattacatgaaaacc
ttccggttcaagatggatgtcatcagtcttgttccactggagttgttctattttaaaact
gggatcaacccactcctccgcttcccacgactactaaagataatgtctttctttgagttc
aacgaccgtcttgagggcatcctgaccaaagcctacgtttacagagtgatccggaccacc
acctacctgctgtactgcctgcactgtaatgcctgtctgtactactggggctctgcgtat
gaaggtctgggctccacgcagtgggtctatgacggacagggcaacagttacatccgctgc
tactactttgctgtgaagaccctaatcaccattggtggactgccggaccccacaacgctc
tttgaaatcatctttcagctcatcaactattttgtaggagtgtttgccttttccatcatg
attggacagatgagagacgtggttggtgcagccacagcaggacagacgtactacagagca
tgcatggacaacactgtcaaatacatggcctcctaccgtatccctaaagacgtgcagaac
cgggttaaaacctggtacaactacacctggcagtcccagggcatgctggatgaacaggag
cttctggtccagctcccagacaagatgaggctggacatcgctgtagatgtcaactatgac
attgtcagtaaagtgtctctcttccagggttgtgatagacagatgatctttgacatgctg
aagagactgaggtctgttgtttaccttccaggggactatgtctgcaaaaagggtgaagtt
ggacgggaaatgtacatcatcaaagccggcgaggtgcaggtggtgggcgggccagacggg
aagactgtgtttgtcacgctgagggcggggtcagtgtttggggaaatcagcttgctggca
gtgggtggagggaacaggagaacagcaaacgtggtggctcatggcttcgccaacctgttc
atcctggacaagaaggacctcaatgagattctagtgcattaccccgagtcccagaagctg
ctccgcaagaaggccaggaagatgctcacgaaagataagaagcctccgaaggagccggcc
caggtgatccctcctcgaatggtcacgcccaagctattcaaagctgctctggatgtggcg
catcagaaaacaggcctcaaagggaccctcgccaagattaaggaaaatatcaacaaatcc
agcgtttctctacagccctccatgtcctcctccctgcctcccttgtccccagtctctcca
gtctccagtctggacccagagcgcgaggctaacgccatgtcaccaaccatagacagctcc
acgctgctctgccccgtctcccattgtcacggagatgagacactctccaaggagcagggc
caagtggcgggagaagttgcaggagagagtgggaagaagaaagaaaagagaaaggcatga
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