Salvelinus fontinalis (brook trout): 129862523
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Entry
129862523 CDS
T11136
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129862523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129862523
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129862523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
RESC9_N
Motif
Other DBs
NCBI-GeneID:
129862523
NCBI-ProteinID:
XP_055790255
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Position
9:37407935..37446379
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AA seq
844 aa
AA seq
DB search
MSFWKTRHHPITVDLRSAGLKFVAMEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEI
QQAGERLRSRTLTRTSQDAADVKASILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDT
DIQGFLKNERDNALLSAIEESRRRTFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDAL
DFSQDIEPSFVSDAGVPGRSALDSVEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVADSL
DDKNVSDMWLMVKQMTDVLLVPAKDTLKSRTALDMQMAFVTQALQFLQNSYKNYTMVTVF
GNLHQAQLGGVPGTYQLVRSFLNIKLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAM
QVVNRAQHQLGDFKTWFQEYMNSPDRRLAPATENKLRLHYRRVLRNCADPYKRAVYCLIG
KCDIADNHGEVADKTEDYLWLKLNQVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSA
SQQPFLYFQVLFLTAQFEAAVAFLFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQ
EAGDPPMVRRLNFIRLLMLYTRKFESTDPREALQYFYFLRNEKNNQGENMFMCCVSELVI
ESREFDMLLGRLEKDGSRKPGVIDKFAGDTRAIITKVALEAENKGLFEEAVRLYELAKNP
DKVLELMNRLLSPVIAQVSAAQSNKERLKNTAVAIAERYRTQGVAGEKSADSTFYLLLDL
MTFFDEYHAGNIDRAYDVMERLKLVPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNI
LFTQCKRLKGATAGTPGRPQRSIEDRDSQLRSQARALITFAGIIPYRMAGDTNARLVQME
VLMN
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttggaaaacgagacatcatccaatcacggtagacctcagaagtgccgggtta
aaatttgttgccatggaagcggagggctttggagaactcctgcagcaggcagagcagctt
gcagcagagactgaggccgtgtctgagcttcctcatgttgagaggaaccttcaggagatc
cagcaggctggagagaggctacgctcccgcaccttaactcgaacatcacaagacgctgct
gacgtgaaagcgtccatcctcctggggtccagaggcctggacatcttccacatctcccag
cgtctggagagcctgagtgctgccaccacctttgaacctctagagccagtgaaggacact
gacatccagggctttctgaagaatgagagggacaatgcgctgctctctgccatcgaggag
tcacgtcgcaggacgttcctcttggcagaggagtaccaccgcgagtccatgctggttcag
tgggagcaggtgaaacagagagtactgcacaccttgttgggagcaggggaagatgctctg
gacttcagccaagacatagagcccagctttgtgagtgacgcaggagttcctggacggagt
gctcttgacagcgtggaggtggcctatggacgacagatctacgtttttaatgagaagata
gtgaatggacatgtccagcccaacctgggagacctctgtgcctcagtggcagacagcctg
gatgacaagaatgtgtcagacatgtggttaatggtgaagcagatgacagacgtgctgctg
gttccagccaaagacacgctgaagagccgcacggccttggacatgcagatggctttcgtc
acgcaggcccttcaattcctgcagaacagctataagaactacaccatggtgacggtgttt
gggaacctgcaccaggcccagctaggaggagtccctggcacctatcagctggtgcgcagc
ttcctcaacatcaaactgccagggcctctgccaggcatgcaggatggtgaggtggagggt
cacccagtctgggctctgatctactactgcctgcgctgtggggacctgggggctgccatg
caggtggtgaaccgggctcagcaccagctgggagactttaagacctggttccaggagtac
atgaacagccctgacagacgcctggcccccgccacagagaacaagctgcgtctccactac
cgcagagtgctgaggaactgtgctgacccctacaagagggctgtctactgcctcatcggg
aagtgtgacatcgcagacaaccatggagaggtggctgacaagaccgaggactacctgtgg
cttaagctcaaccaggtgtgcttcgatgacgacggcagcagtgctcctcaggacagactg
acactggcccagctacagaaacagcttctagaggactacggagagtcccacttctcggcc
agccaacagccgtttctgtacttccaggtgctgttcctcacggcccagtttgaggctgct
gtggccttcctgttccgggtggagcgtctacgcagtcatgcagttcacgtggctctggtt
ctctacgagctacggctgctgctcaagtcatcaggacagagcgcacaactgttgagtcag
gaagctggggacccccctatggtgcgtcggctcaacttcatccggctgctcatgctctac
acgcgcaagtttgagtccacagacccccgggaggctctacagtacttctacttcctacgg
aatgaaaaaaacaaccaaggagagaacatgttcatgtgctgtgttagcgagctggtgatt
gagagtcgagagtttgacatgcttctaggaagactggaaaaagatggcagcagaaagcct
ggagtgattgataaatttgccggagacactcgagccattatcacaaaagtggcgctggag
gctgagaacaagggcctgtttgaggaagcagtcagactgtatgagctggccaagaatcca
gacaaggtcttagagctgatgaacaggctgctgagtcctgttatcgcccaagtcagcgct
gcccagtccaacaaggagagactgaagaacactgctgttgccatcgctgagcggtaccgg
acccagggtgttgctggagagaagtctgcagacagcaccttctacctgctgctggacctc
atgaccttctttgatgagtaccatgctggaaatatagaccgggcctatgatgtgatggag
agactgaagctggtccctctgagtcaagacagtgtggaggaaagggtcgctgcatttcgc
aatttcagtgatgaggtcaggcataatctgtcggaggtactcctggccaccatgaatatc
ctgttcacgcagtgcaagcgcctgaagggggccacagcaggaacccctggtcgaccacag
aggtccatcgaggacagagactcgcaactgcgcagccaagcccgtgcactgatcacattt
gctgggattatcccgtaccgcatggcaggcgacaccaatgcccggctggtgcagatggag
gtcctgatgaactga
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