Salvelinus fontinalis (brook trout): 129863413
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Entry
129863413 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129863413
04082 Neuroactive ligand signaling
129863413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129863413
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129863413
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129863413
NCBI-ProteinID:
XP_055791357
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Position
10:3674386..3687104
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AA seq
480 aa
AA seq
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MNLVLLAFRLMCLAWLWPVTLLNGSQRPNKRRHKDVYLGENTKNQHGGRIDFKMKKSDST
KSLLIKSEQLLRIEDHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSNRSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY
SVRITVTALCAMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFF
IEEFHPSFGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRA
VPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYATVNYFT
TVEEMKKLKGGKIPANFNATQTMAFDGCYHDNDIDLMPFPELPSTPNTERSRTATLRNSR
NFAAEPPPTEGTRLRRRKSIKHNLSFIMSNSYMIDSYSRVIFPMTYLLFNITYWSLYSSR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgctcctggccttcaggctgatgtgcctggcctggctgtggcctgtcaca
ctgctcaacggcagccaacgacccaacaagaggaggcacaaggacgtgtaccttggggag
aacaccaagaaccaacatggaggacgaatagactttaagatgaaaaagtctgacagcacc
aagtccctgcttattaaatctgaacagctgctccgtatcgaggaccatgactttgcaatg
cggcctggctttggaggggcagctattcctgtgggcatagacgtgcaggtggagagcatt
gacagtatatctgaagtcaacatggacttcaccatgactctgtacctgagacactactgg
caggacgaccggctggcattcccttccagcagcaacaggagccggacatttgacgctcgg
ctggtgaagaagatctgggtgccggacgtgttctttgttcactccaaacgctccttcatc
catgacacgaccatggagaacatcatgctgagggtgtaccctgacggcaacattctctac
agtgtcaggatcactgtaactgctctttgcgccatggacttcagtagttttccgttggac
acacagaattgctctctggaactggagagctacgcgtacaatgagaacgacctcatgctc
tactggaagaacgggaacgattcattaaggactgacgagatcgtgctctcgcagtttttt
attgaagaatttcacccttccttcgggcttgccttctacagcagcacgggttggtataac
aggctctacataaacttcatcctcaggcggcacatcttcttcttcatgctgcagacctat
ttccccaccatgctgatggtgatgctctcctgggtgtccttctggattgacaggagggct
gtgcccgcccgggtctctctgggcatcaccacagttctgaccatgtccaccatcatcaca
ggcgtgtcagcctccatgccccaggtctcttatgtgaaagcggtagatatctacctgtgg
gccagcttcctgtttgtcttcctgtccgtcatcgagtacgccaccgtcaactacttcacc
actgtggaggagatgaagaagctcaaggggggaaagatccctgccaatttcaatgccact
caaactatggcctttgatggctgttaccatgacaatgacattgacctgatgccattccca
gagctgcccagcacccccaacacagagcggagtcggacggccacattgaggaactcgagg
aactttgctgcagagcccccgcccacggagggcaccaggctacgacgcagaaaatccatc
aaacacaacctcagcttcatcatgagtaacagctacatgatcgactcctactccagagtc
atcttccccatgacctacctgctgttcaacatcacctactggagcttgtactccagtagg
tga
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