Salvelinus fontinalis (brook trout): 129863448
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Entry
129863448 CDS
T11136
Symbol
si:dkeyp-50d11.2
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04141
Protein processing in endoplasmic reticulum
sfon04210
Apoptosis
sfon04217
Necroptosis
sfon04218
Cellular senescence
sfon04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129863448 (si:dkeyp-50d11.2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129863448 (si:dkeyp-50d11.2)
04217 Necroptosis
129863448 (si:dkeyp-50d11.2)
04218 Cellular senescence
129863448 (si:dkeyp-50d11.2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129863448 (si:dkeyp-50d11.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129863448 (si:dkeyp-50d11.2)
Enzymes [BR:
sfon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
129863448 (si:dkeyp-50d11.2)
Peptidases and inhibitors [BR:
sfon01002
]
Cysteine peptidases
Family C2: calpain family
129863448 (si:dkeyp-50d11.2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
129863448
NCBI-ProteinID:
XP_055791431
LinkDB
All DBs
Position
10:complement(4674014..4681868)
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AA seq
712 aa
AA seq
DB search
MEQVMEHVIERVFASGVAARLRSQWDRNEGIGQNDKALKFLGQDFEYLRSHSLQSRRLFE
DDAFPAQLSSLGFKELGSHSTKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWL
LAAIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLF
LHSAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFDLKKAHPDLFSI
ISRAVERGSLLGCSIDISGVFEMEAVTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNP
WGEMEWTGAWSDNSREWAGVDPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADA
LQASQVKKWSSALYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDTDGQSGCSFLVA
LMQKDRRRQRREGKDMETIGFTIYEVPEEFTGQAGVHLKRDFFLTHGSSARSELFINLRE
VSTRFCLPQGEYIVIPSTFEPQKDGDFVLRVFSEKPADSQELDDDITADLPEEVELDESQ
IDAGFKGLFRQLAGAEMEISASKLQTILNRIISKHKDLKTDGFGKEACRCMITLMDTTGT
GKLGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILR
YSKEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgatggagcatgttattgaacgtgtgtttgcctctggagtggctgctcgt
ttgaggagccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttc
ttaggccaagactttgaatatctccggtcccacagtctgcagagcagacggctgtttgag
gacgatgcattccctgctcagctctcgtcgctgggcttcaaggagctggggtcacactct
acaaagacacagggggtccgatggatgcgccccacggagttctgctctgaccctcacttc
atcgtagacggagccacgcgcacagacgtctgccagggagctctgggtgactgttggctg
ctggcagcgattgcttcactcacactgaatgagactctactacatcgggtggtgccccat
gggcagagcttccaccaacagtatgctgggatctttcacttccaattctggcagtttggg
gagtgggtggatgtggtgattgatgacaggctgccagtgaaggatgggaagctgctgttt
ctccactcagcagagggggctgagttctggagcgccctgctggagaaggcctacgcaaag
ctcaatggctgttacgaggccctctcagggggcagtacatcggaggggtttgaggacttc
acagggggcgtgacagagatgtttgacctgaagaaggcccatccagacctgttcagcata
atcagtagagcagtggagcgaggttcccttctgggatgctccatagatatctctggtgtt
ttcgagatggaggcggtgacattcaagaagctggtgaaaggccatgcctactctgtgaca
ggtgtggaggaggtggagtttaaaggaagtcccaccaagctcctgcggatcaggaacccc
tggggagagatggagtggaccggagcctggagtgacaattcaagagagtgggctggagtt
gacccatcggtcagagctagattgtacaaccgtagcgaagatggcgagttctggatgtca
ttccgtgactttctgcgtgagttcagccgtttggagatctgtaatctgacagcagacgcc
ctgcaggccagccaagtgaagaagtggagctcagcgctctaccctggagagtggaggaga
ggcagcactgcagggggctgcaggaactacccagcaacgttctggctcaaccctcaattc
aaagtggcccttcagcacccagacacagatggccaatcaggttgcagcttcctggtggcg
ttgatgcagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattgga
ttcaccatctatgaggttccagaagagtttacaggtcaggccggggtgcatctaaagagg
gacttcttcctgacccatggctccagtgcccggtcagagctcttcatcaacctgagagag
gtcagcacccgcttctgcctgccccagggagagtatatcgtcatcccctccaccttcgag
ccccagaaggacggagactttgtgctcagggtgttctctgaaaagccagctgactcccag
gaattggatgatgatatcacagctgatctgcctgaggaggtagagctggacgagagccag
attgatgcaggcttcaagggtctcttcagacagctcgctggagcggaaatggagatcagt
gcctccaagcttcagaccatcctaaacagaatcatcagcaagcataaggacctgaagaca
gacggctttgggaaggaggcgtgtcgttgcatgataactctcatggataccaccggcact
gggaagctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgact
gtgtttaggaagtttgacctggataaatctggcaccatgagctcctatgaaatgcggatg
gcactggaatcagctggcttcaagttgaccaaccacttgttccaactcatcatcctacgc
tactcaaaggaagacctgaatgtggacttcgataactttgtcaactgtctcatccgtctg
gagaccatgttcaagacctttaaagaaatggacactgatgtagatggggtggtttccttc
agcttcttccagtggatctccctcaccatgtttgcctag
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