Salvelinus fontinalis (brook trout): 129863846
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Entry
129863846 CDS
T11136
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129863846
04020 Calcium signaling pathway
129863846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129863846
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129863846
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
129863846
NCBI-ProteinID:
XP_055792148
LinkDB
All DBs
Position
10:24063540..24281923
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AA seq
2258 aa
AA seq
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MSERLDDTEPYFIGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEFY
MGKFHSTCFTVDTGERAAAFPCGTEAPSRMCPNGTECTEYWIGPNYGITNFDNILFAVLT
VFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDGAWYKRKQNLPV
LKRGKVKKSKKDLIGAEEGEDHFTDMSSVAPPGSPFGRASVKSIKLDSSSYFRRKERRMR
FFIRRMVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSLK
MYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYW
NSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAA
ILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNL
ANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAVFVKQNRDVLSRSSSVS
SVHSPKEQQRANKMMSVWEQRTNQLRQNNLRGSSEALFNELDPEERLRVSSALHLHPDMK
THNDRPLVVEPGNGDKPRPPKEDRDGADPQQEGGDPHGPQLRKHHRHRERNGENGESRHH
THHSRSRDHYHPDGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGAEEREHRHHH
SHRQPREENGALANGARVERKGRGHKEGNGEGNGERRRYRSHMVRAQSTLDGEECRENGK
RDGDRDQGHRASLDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVH
IPVTITAPPRETTIIPMNNIDCESLPLNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQT
NPVRRLCHYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTF
EMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVL
RPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESK
SLEKDCRGKFLDYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVD
ATYEDQGPNPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNE
RACIDFAINAKPLTRYMPADKQSFQYKMWKFVVSPPFEYSIMTMIALNTVVLMMKFHGAP
ELYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIK
DKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGM
QVFGNIELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGG
KECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEY
DPAACGRMTYLDMYEMLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMA
LIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNELICPFA
VVNRELTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMMPMTHLQ
EETPITTAKPPPPSQPEPEPQPEPPPATSSLTNGDTVPSPRSAIKESVSGDQLSQEGQRS
STSSRTLQRGQSEDVPYSIKPQESVEMRQVENGADLEGYFGLEGHGRAASMPRLDSQYYP
IPDISPIRRSASTLASQRPQEVSLSDYTLERPSQAQAQSSSVPGQAQDRPYHHHHHHRCH
RRRDKERDKKQKSLDRTSSVQPSSIAGLPADPAVEGLSGERARERDRGRPQERRHHSAAG
EKQRYYSCERYGGREHYHTKSAGPSRSTSPGETHDLGLFKQSIGMAKGSQVVLTSAFSTP
CRGRRQLPQTPLTPRPAVAYKTANSSPVQFGATGHKSSLSRGLSEHSALLESPAMPVTRI
GSDPNLSPQLRGAPPRSLPEEPDDFQDAVSTHGGGGGRSPRTSASASHGAAEPSSAPAPQ
GRAAVPNGYHFTLGVNAGSSSSTRGTGSFREKEEDDWC
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgcctggatgacacagagccctactttattggaatattctgtttcgagggc
ggcattaagatcatcgccttgggctttgcatttcacaaaggctcatacctccgcaacggc
tggaacgtaatggactttgtggtcgtcctcactgggatcctggctacggtgggctcagac
tttgacctaaggactctgcgggcggtgagagtactcagacctctcaaactggtgtctggc
atccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctccag
ataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttctac
atgggcaagttccactccacctgcttcactgtcgacaccggtgagcgtgcagcagcgttc
ccctgtggtacggaggccccatccaggatgtgtcctaacggtacagagtgtacagagtac
tggatcggccccaactatggcatcaccaactttgacaacatcctgttcgccgtgctcacg
gtcttccagtgcatcaccatggagggatgggtggacatcctctacaacgccaatgatgcc
tcggggaacacctggaactggctctacttcatccccctcatcatcatcggatccttcttc
atgctcaacctggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgtgtg
gagaagaggcaggactttctgaagctgcgccgacagcagcagatagagagagagctgacg
gggtacctggagtggatatgcaaggcagaggaggtgctgctggaggaggaggatgagaac
gcggaggagaagtcccctctggatggtgcgtggtacaagaggaaacagaacctcccagtg
ttgaaacgaggcaaggtcaagaagagtaagaaagacctgatcggtgctgaggagggagag
gatcactttactgacatgtcctctgtcgctccccctggctcaccgtttggccgggccagc
gtgaagagcattaagctggacagctcatcctacttccgccgcaaggagaggagaatgcgt
ttcttcatccgtcgcatggtcaaagcccagagcttctactggacagtcctttgcctggtg
gggctcaacacactgtgtgtggccatcgtccactatgaccaacctgagtggctcaccact
gccctgtacctggcagagtttgtgttcctgggtctgttcctatctgagatgagcctgaag
atgtacggcctgggagccaggaactacttccattcctctttcaactgcttcgactttggt
gtgataatagggagtatacttgaggtggtgtggtcgatgatcaaaccaggggcatcctac
ggcattagtgtactgagggctcttcgtctgctcaggttgttcaagtttaccaagtactgg
aactccctgaggaacctggtggtgtctctgctcaactccatgaagtccattatcagcttg
ctcttcctcctcttcctcttcattgtggtctttgctctgctgggcatgcagctttttgga
ggacagtttaatttcgaagaggagacgccgacgaccaacttcgataccttcccggcggcc
attctcaccgtcttccagattctgactggcgaggattggaatgcagtaatgtatcatggc
attgagtctcaggggggcgtgcggcggggaatgttctcctcggtctacttcatcgtcctc
acactctttggaaactacactctcctgaacgtctttttggctatcgccgtcgacaacctc
gccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaagccaataagaag
ctggccctgcagaaggccatggaggtgaaggaggtcagccccatgtcagcagccaacatc
tccatcgctgtttttgtaaagcaaaatcgagatgtactctctcgcagctcgtccgtctcc
agcgtacattcacctaaggagcagcagagagccaataagatgatgtcggtgtgggagcag
cgcaccaaccagctgcgtcaaaacaacttgaggggcagctcagaggctctgttcaatgag
ctggacccagaggaacgactgcgtgtctcctccgccctccacctgcaccccgatatgaag
acccacaacgaccgccccctagtggtggagccaggcaatggggacaaaccacgacccccc
aaggaggacagagatggagcagacccccagcaagagggaggagacccccacggcccacaa
ctccgcaagcaccaccgtcaccgggagaggaatggggagaacggggagagcaggcatcac
acccaccacagccgcagtagggaccactaccacccagacgggccccggcctaaagaagga
aaggtggagaggagccatagtcgagaggggggccagggccacaggcaccatcaccaggct
ggatccccggaggaaggggtgaacggaggggcggaggagagggagcaccgccaccaccac
tcccacagacagccccgagaagagaacggggccctggctaacggggccagagtggagagg
aagggccgggggcacaaggaggggaatggagaggggaacggagagaggaggagataccgc
tcccacatggtcagggcccagtcaactctggatggagaggaatgcagagagaatggaaag
agagatggagacagggaccagggacacagagcttcactggacgctcaaggggagagccta
gccaccagccctgtgcagcctcctgcaggtctgcaggccggagagaagcaagaggatgcc
gacaaccagaagaacagccacagagccagccaggcaggcctcaacagcaatactgtccac
atccctgtcaccatcaccgccccgcccagagagaccaccatcatacccatgaataacata
gactgtgagagcctccccctgaacgaggagaagaagaacttagaggaggatgaggaggag
ctgaagaacggccccaaacacattctaccctacagctccatgtttgtgttcgggcagacc
aacccggtgcgtcggctgtgtcactacgtggtgaacctgcgttactttgagatgtgtatc
ctgtcggtcatcaccatgagcagcatagccctggctgctgaagaccctgtacaggccaat
gcaccccgcaataacgtgctcaagtatctggactacgtcttcacgggagtgttcaccttt
gagatggtgattaagatgatagacctgggactgctcctccatcctggttcatacttccgc
gacctctggaacatcctggactttatcgtggtcagtggagctctggtggcgttcgcctgc
tcaggaactaaaggcaaggacatcaacaccatcaagtccctcagggtgctgcgagtcctg
aggcccctgaagaccattaaacgactgcccaagctcaaggctgtgtttgactgtgtggtc
aactctctgaagaacgtgctcaacatcctcattgtctacatgctcttcatgttcatcttc
gctgtgatcgctgtgcagctgttcaagggcaagttcttctactgcaccgacgagtctaaa
agtctggagaaggactgcaggggtaagtttctggactatgaccgtgatgacgtggctgcc
caggatcgtgagtggagaaagtacgagttccattatgataacgtgctgtgggccttcctc
accctcttcaccgtctccaccggggagggctggccaatggtcctaaagcattctgtagat
gccacctatgaggaccagggtcccaacccaggcttccgtatggagacctctatcttctac
gtggtctactttgtggtctttcccttcttcttcgtcaacatctttgtggctctcatcatc
atcaccttccaggagcagggagacaaggccatgtcagagtgtagtctggagaagaacgag
agagcttgtatcgactttgccatcaacgccaagcctctgacgcgctacatgccagcagac
aagcagtcgtttcagtataagatgtggaagtttgtggtgtcgccgccctttgagtactcc
atcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcacggtgctccg
gagctgtacgaggccatgctgaagtacctgaacatcgtgttcacagctctcttcacactg
gagtgcatcctgaagatcatcgcttttggaccactgaattacctgaaggcagcctggaac
gtgtttgactttgtgacagttttggggagtatcacggacatcttggtcacagagattaag
gacaagctgatcaacctgagtttcctgaggcttttcagggcggccaggctcatcaagcta
ttgaggcagggctataccatccgcattctgctgtggacctttgtccagtccttcaaggcc
ctaccttacgtctgcctcctcatcgctatgctcttctttatctatgccatcataggcatg
caggtgtttggaaacattgagctgaatgaggaatcggccatcaaccaccacaacaacttc
cagacattctttcaggctctgatgcttctgttcaggagtgcaacaggcgaggcgtggcat
gagattatgctgtcgtgtctgagtaaccgtccgtgtgataagctgtcagggtccggaggg
aaggagtgcggcagtgactttgcttacttctactttgtctccttcatcttcctctgctcc
ttcctgatgctcaacctttttgtggcggtcatcatggacaactttgagtacctaaccaga
gatgcctccatcctggggcctcaccacctggacgaatttatccgcgtctgggccgagtac
gaccctgctgcctgtggccgtatgacctaccttgatatgtacgagatgctccgccacatg
tcccctccgctaggtttgggaaagaaatgcccgcccagaatcgcctataagcgattggtc
aagatgaacatgcccatcgccgatgacaatacagtgcacttcacgtccacgctgatggct
ctcatccgcaccgctctggagatcaaactggcatctggggtgctggctcagcgcctgtgt
gatgctgatctgaggaaggagatctccagagtctggcctaacctgcctcagaagactgtt
gacctgctggtcacaccatataaaattgatgagttcaatgagctcatatgcccctttgcg
gttgtaaaccgagagctgacagtggggaaggtctatgctgccctcatgatctttgactac
tacaagcagaaccgggccaagagactagaacagcaactgggactggacttcacagggaca
attaagaataaaaagggtgcagccttcttccgccccatgatgcccatgacccatctgcag
gaggagacgccaatcaccactgccaagcccccgcccccctcacaacctgaaccagagcct
cagccagagcctccgcccgccacctcctctctaaccaatggtgacacagtaccaagccct
agaagtgccataaaagagtccgtatcaggagatcagctgtctcaggagggccagcggtcc
agcactagcagtcggactctacagaggggccagtcagaggacgtgccctactccatcaaa
cctcaggaatcagtggagatgaggcaggtggagaacggtgctgatttagagggctacttt
ggtctggagggccatggcagagcagcttccatgcctagactggactcccagtactatcct
atacctgacatcagtcctatcaggcggtcggcgtccacgttggcttcccagcgcccccag
gaggtgagtctgagtgactacaccctggagaggcctagccaagcccaggcccagtcgtcc
tcagtcccaggccaggcccaggacaggccctaccaccatcaccaccatcaccgctgtcac
agacgcagggacaaggagagggacaagaagcagaagtcactcgacaggacatccagcgtg
cagccttctagtatagcaggtttgcctgctgaccctgccgtggagggcttgtccggggag
cgggcgagggagcgtgaccgaggcaggcctcaggagagaaggcatcactctgctgccggg
gagaagcagcgctactactcctgtgagcgctacggaggcagggagcactaccacaccaag
tcagccggcccgagccgctccacctcccctggagagacccatgacctaggcctcttcaag
cagagtatcggcatggctaaaggcagccaagtggtcttaacttcagcgttcagcacaccc
tgccgtgggcgcagacagctcccccagacccccctcaccccccgccccgccgtggcctac
aagaccgccaactcctcacctgtgcagtttggtgccacggggcacaaatccagtctcagc
cgtggcctctcggagcatagcgcgctgttggagtcacccgccatgcccgtcacccgcatc
ggctcagaccccaacctgagcccccagttgcggggtgcccctccacgcagcctccctgag
gagcctgatgacttccaggacgctgtgagcacccatggagggggaggtggccgctccccc
aggacctctgcctcagcatcccatggggctgctgagccttcctctgcacctgccccacaa
ggccgggctgcggtcccaaacgggtaccacttcactctgggggtcaacgccggttcgagt
tccagcaccagaggaactgggagcttccgggagaaggaagaggatgactggtgctag
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integrated database retrieval system
