Salvelinus fontinalis (brook trout): 129867688
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Entry
129867688 CDS
T11136
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129867688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129867688
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129867688
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
129867688
NCBI-ProteinID:
XP_055797226
LinkDB
All DBs
Position
12:11357378..11391966
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AA seq
1395 aa
AA seq
DB search
MFNWVVKVVPQPPDAPGSLGQETANPPPASPSLQEVQREDERNGMIKWIAEGLSKVVPQP
DDKYREDIREEEEEETEVYNMKDVPDAEPLPHIPVVEIFSDDEEEDRVPQFPLKVVNWIK
NVIPQPVMLPAGYVEAQSKAQSKRSSLDKVLSPPPESLKGDEDSQNSNVVGWFVTGLGLK
MPQPVARSRDDVEVVQNVSKQPKAVDLVLEEVVEADLKDLNQEVPSKAMQSEPPQPFKPA
QTTQPTQTTQSQPAQPKQPVKPEEPEQTLPNVPESTTPSLEDAETQTGRWTPFIESIKRE
AEGVAMATMEERMTQERVDLVRMAEEVARHTAETAIRQMQEAQSIKLSIHSQEAILEEDE
DPELHMLREEESEVEHTKNKMTECQVCPAKEEPVDAAKSAAQSERDSASPDVEPEPQEEL
KSQRASPSPPPSPEPDPVKTVEPDPKPKAQDAKVAPEPVTQQPQKAEGAEDGTAPDTTTK
EEGETAEEGGCGASSRLSVHPAVNVEDVDSGGGGHHRHIRQILTPQDPNLKTLTVPRVSK
ASRQSKVADKDPSSTSFCFSDLLHPPLFLNHLPNHWLGFASSASLPQPSPQPLARICFIR
LSSSTISPTIGSDLLHPPLFLNHLQNHWLGFASSASLPQPSPQPLELFHTHSNTHTLTLT
HSSVPVDGTMGWPSERNPRKIKNLHSQSEDDDEEETETAVRAWPSQSSILSGDDGPKERP
ASSASQASYVVNERLQELVKMFKERTERAKEKLIDPDDSDDDSPTASPVRAPTPPPAPPE
EPEEEAQPASPEREMEEQQTQSRLCCKVTPPRWIRALLHYRFPSSIDPFTNLVYVLWLFF
VTLAWNWNVWLIPMRWAFPYQTPSNIYLWLLADYLCDLIYILDIMVFQPRLQFVRGGDIV
FDKKDMRKNYMKTFRFKMDVVSLVPLELFYFKTGINPLLRFPRLLKVMSFFEFNDRLEAI
LTKAYVYRVIRTTTYLLYCLHCNACLFYWISAYEGLGSTKWVYDGKGNSYIRCYYFAVKT
LITIGGLPEPTTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATSGQTYYRACMDNTVK
YMASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSL
FQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTL
KSGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARN
MLTKDKKPQEPPKEPAQVIPPRTETPKLLKAALEMARQKTGLKGTLAKIKENTNISSISL
QPSMSSSLSPLSPVSPVSSLDPERKSGIMSPTSDSSTLLRPASHCHRGETLSKEQDNVAE
EEAGESGKRKEKRKP
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttcctcagccccctgacgcccctggctctctggga
caggagacagccaatcccccacctgcatcaccatcactgcaggaggtacaaagagaggac
gaaaggaatgggatgattaagtggatagcagagggactgagcaaagtggtgcctcagccg
gatgacaagtacagagaggatattcgagaggaggaggaggaggagacagaggtttataac
atgaaagatgtgccagacgcagagcccctcccacacatacctgtggtggagatcttttca
gacgatgaggaagaggatcgggtaccacagttccccctcaaagtggttaactggattaag
aatgttattcctcagcctgtgatgctccctgcaggttacgtagaggcccagagtaaggcc
cagagcaagaggtcatctcttgacaaagttttgtcgccacctcctgagtctctcaaaggt
gacgaggactcacaaaactccaatgtcgtgggctggtttgtgacgggcctcggcctcaag
atgccacagcctgtcgcgagatcaagagatgacgttgaagttgtgcagaatgtctctaaa
caacccaaagcagtggacctggttctggaggaagtagtagaagcagacttgaaggatctg
aatcaggaagtgccatccaaggctatgcagtcagaaccaccacagccttttaagcccgca
cagacgacacagccaacacagacgactcagtcacagccagcacagccaaaacagccagtg
aaaccagaagagcctgaacagactcttccaaatgtgccagagtctacaacaccatcgctg
gaggatgctgagactcagacgggcaggtggactcccttcatagagagcatcaagagagaa
gctgagggcgtagctatggctaccatggaggaacggatgacccaggagcgcgtggatttg
gtgcgaatggcggaggaggtggccagacacacagctgagacggccatcaggcagatgcaa
gaggcacaatcaatcaagctttccattcacagccaggaagccattctggaagaagacgag
gacccagagttacacatgctacgggaggaggagagtgaggtggagcacactaagaataag
atgacagagtgtcaggtgtgtcctgctaaggaggagccagtggatgcagcaaaaagtgcc
gctcagtcagagcgtgactctgcatcacccgacgttgaaccagagccccaggaagagcta
aagtcccagagggcctctccatcccctcctcccagcccagaaccagatccagtcaagaca
gtagagcctgaccctaaaccaaaggcccaggatgccaaagtagcacctgaaccggtgacc
caacaaccacagaaagcagagggggcagaggacggaaccgcacctgacaccactaccaag
gaggagggggagactgcagaggagggtggctgtggtgcgagctccaggctcagtgtgcac
cctgctgtcaacgtggaggatgtggattcaggcggaggggggcaccatcgacacattcgc
caaatcctcaccccccaggaccccaacctcaagaccctgaccgtaccgagagtgtcaaaa
gccagccgccagagcaaagttgctgataaagatccctcttctacctcattctgtttctcg
gatttgcttcatccgcctctcttcctcaaccatctccccaaccattggctcggatttgct
tcatccgcctctcttcctcaaccatctccccaaccattggctcggatttgcttcatccgc
ctctcttcctcaaccatctccccaaccattggctcggatttgcttcatccgcctctcttc
ctcaaccatctccaaaaccattggctcggatttgcttcatccgcctctcttcctcaacca
tctccccaaccattggagttattccacacgcacagcaacacacacactctcactctcaca
cactcctctgtccctgttgatggaaccatgggctggcctagtgagaggaatcccaggaag
ataaagaacctgcactctcagagtgaggatgatgatgaagaggagactgagaccgcagtg
agggcgtggcctagccagtccagcatcctcagtggagacgatgggccgaaggagcggcct
gcgtcgtccgctagccaggccagctacgtggtgaacgagcgcctacaggagctggtcaag
atgtttaaggagaggacagagagggccaaagagaaactcatagacccagatgactctgat
gatgacagtcccactgcctcccctgtgagagctccaacacctcctcctgcacctccagag
gagccggaggaggaagcacaaccagcttcccctgagagggagatggaggagcagcaaacc
cagtctagactgtgctgcaaggtgacgcctcctcgctggatcagagccctgcttcactac
cgcttcccctctagcatcgaccccttcaccaatctggtctatgtgctgtggctatttttc
gtcaccttggcgtggaactggaacgtgtggctgatcccgatgcgctgggccttcccctac
cagacccctagtaacatctacctgtggctgctagccgactacctgtgtgacctcatctac
atcctggacatcatggtcttccagccccgcctgcagtttgtccgcggtggcgacatagtg
tttgacaaaaaggacatgcgaaagaattacatgaaaactttccggttcaagatggatgtc
gtcagtcttgtgccactggaattgttctattttaaaactgggatcaacccactcctccga
ttcccacggctactaaaggtaatgtctttcttcgagttcaacgaccgtcttgaggccatc
ctgaccaaagcctatgtttacagagtgatccggaccaccacctacctgctgtactgcctc
cactgcaacgcctgtctgttctactggatctctgcgtatgaaggtctgggatccacgaag
tgggtctatgatgggaagggcaacagttacatccgctgctactactttgctgtgaagact
ctgatcaccattggtggactgccggagcccacaacgctctttgaaatcatctttcagctc
atcaactactttgtaggagtgtttgccttttccatcatgatagggcagatgagagatgtg
gttggtgcagccacttccggacagacgtactacagagcatgcatggacaacactgtcaaa
tacatggcctcctaccgtatccccaaagacgtgcaaaaccgggtcaaaacctggtacaac
tacacctggcagtcccagggcatgctggatgaacaagagcttctggtccagctcccagac
aagatgaggctggacatcgctgtggatgtaaactatgacattgtcagtaaagtctctctc
ttccagggttgcgacagacagatgatctttgacatgttaaagagtctgaggtctgttgtt
tacctccccggggactatgtctgcaaaaagggcgaggttggacgggagatgtacatcatc
aaggccggggaggtgcaggtggtgggcgggccagacgggaagaccgtgtttgtcacactg
aagtcggggtcagtgtttggggaaatcagcttgcttgcagtgggtggaggaaacaggaga
acagccaacgtagtggctcatggcttcaccaacctgttcatcctggacaagaaggacctc
aatgagattttagtgcattaccccgagtctcagaagctgctccgcaagaaggcaaggaat
atgctgacaaaagacaagaagcctcaggagcctccgaaggagccggcccaggtgatccct
cctcggacagagacacccaagctacttaaagctgctctggagatggctcgtcagaaaaca
ggcctcaaagggacccttgcaaagattaaggagaacaccaacatatccagtatttcgctt
cagccctcaatgtcctcctccctgagccccctgtccccagtctctccagtctccagtctg
gacccagagcgcaagtctggcatcatgtccccaacctcggacagctccacgttgctccgc
cccgcctcccattgtcacagaggtgagacgctgtccaaggagcaggacaacgtggcagaa
gaagaggcaggagagagtgggaagcggaaagaaaagagaaagccatga
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