Salvelinus fontinalis (brook trout): 129868510
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Entry
129868510 CDS
T11136
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129868510
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfon01001
]
129868510
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129868510
03036 Chromosome and associated proteins [BR:
sfon03036
]
129868510
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
129868510
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129868510
Protein kinases [BR:
sfon01001
]
Serine/threonine kinases: Other
TAF1 family
129868510
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129868510
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
129868510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
129868510
NCBI-ProteinID:
XP_055798529
LinkDB
All DBs
Position
13:complement(35079693..35132836)
Genome browser
AA seq
1993 aa
AA seq
DB search
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEGDSVLDTESKKHLAGLGSLGLGNLITEIT
ASEEDDLDEDGDTGGTDSEGWVKNDADAVDYSDINEVAEDETKKYRQAMGSLQPTRRTDD
EDDYDADCEDIDAKLMPPPPPPCLSTPGGKKDDSSPTAASVGDEGDGIILPSIIAPSSLV
DKVDFSSSSDSESETDRPSAGPGSGGSPACLSLPLAGIMQKDAAKALPGVTQLFPEFRPG
RVLRFLRLFGPGKNMPSVWRSARRKRKRKHRDPQPGTPPPEGAEPMEQQGPEKKSGWDYE
YAPPPPPEQCLSDDEITMMAPIESKFSQTSGDGDKVTESRPKVAEWRYGPAQLWYDMMGV
PDDGSGFHYGFKLKEEEDDEQEKRERPEPPPPLQHPKEEGSGDEKDKQALENELFLMVTQ
LQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGIHDVYLHSTGLSRS
NSQLVPPTPPPMPKAPSIGSGSKRDKHHHDHHATHEEDAPWFSIFPIDNEELVYGRWEDN
IIWDDQAMDRMLSPPVLTLDPNDENIILEIPDEKESERMSHSPSKENKKESSLKKSRILL
GKTGVIKDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPF
FPTHMGPMKLRGFHRPSLKKYSFGTLSQPGPHAAQPLLKQIKKKAKMREQERQASGGGDM
FFMRTAQDLTGKDGDLILAEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDCKYGET
VYCHTSPFLGSLHPGQLLPAFENNLFRAPIYLHKMPETDFLVLRTRQGYFIRELVDIFVV
GQQCPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSI
RKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAG
YGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVMGVADPTGCGEG
FSYVKVPNKPTQQKAQDDREPQPAKKTVTGTDADLRRLSLKNAKQLLRKFCVPEEEIKKL
SRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLDST
EVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDR
DHKGRKGFSSALSTGSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKP
SVIDAYTRIRTTKDDEFIRKFAVFDEQHREEMRKERRRIQEQLRRLKRNQEKDRFKGPPE
KKAKKVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKT
VIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQHLPPKKKRRVGTTVHCDY
LNRPHKSIHRRRTDPMVTLSSVLESVINDMRDHPNTYPFHTPVNAKVVKDYYKVIPRPMD
LQTLRENVRKRVYPSREEFRENVELIIKNSATYNGAKHPITQVAQTMLDLCDEKLKEKED
RLVRLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVQ
PMDLENVRKNISKHKYQNRDVFLFDVSLVHTNSVKYNGPDSPYTKTALEIVNVCKQTLAE
YDEHLTQLEKDISTAKEAALDAADLDSLDPMTPGTYTSQPADVFDSSASVSLHRETRLFS
EVKASLMTVPEKRGLGKGRHRRLGEEESDVDIEGFEEEEYDCKPKTPAPAEDGEGDLEDE
DDEEEMLLPPPRRRLQGHNDDDYEEDEVTSRPAHASVLYQDLLMSDGEDDASEEEGDNPF
SSIHLSESGSDSDREVEVRPPPPPRPHQETARMGLEQDDSMMSYGEDVPDETHLEDSNVS
YGSYEEPEGQTQTQTSSMGNGEGYGMSEEEEEDEEAARRRGPSVLSQVQLSEDEEDSEEF
RSIGGDSDMDSDN
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagacagtgatgaagaccaagaccgccccttctctctcactggcttcctc
ttcgggaacatcaatgaagatggtcagctggaaggagacagtgtgctggacactgaatcc
aaaaagcacctggctggcctgggctccctgggactgggcaacctcatcacagagatcact
gctagtgaggaggacgatctggacgaggatggagacacaggtggcacagactcagagggc
tgggtgaagaacgatgccgatgcagttgattattctgacatcaacgaggtggctgaagat
gagactaagaagtatcgtcaggccatgggcagcctgcagcctacgaggagaacagatgat
gaggatgactatgatgcagattgtgaggatattgatgccaagcttatgccccctccacct
cctccatgtctctccacgcctggtggcaagaaagacgactcctctcccacggctgcaagt
gttggggatgaaggagatgggatcatcctgccctccatcatcgctccctcctctctggta
gacaaagtggacttcagcagctcctcagactctgaatcggagacagaccggccctctgca
ggccctgggtcagggggttctccagcctgcctcagcttgcccctggctggcatcatgcag
aaggatgctgccaaagccctgcctggcgtcacacagctcttcccagagttcaggcctgga
agggtgctgcggttccttcgactgtttggccctgggaagaacatgccgtcggtgtggcgg
agcgcacgaagaaagaggaagaggaagcaccgcgaccctcagccagggacacccccacca
gagggcgctgagcccatggagcagcagggaccagagaagaagtctggctgggactatgaa
tacgccccaccgccacccccagaacagtgcctgtctgacgacgagatcaccatgatggcc
ccaatagagtccaaattctcccagacctctggagacggggacaaggtgacagagtccagg
cccaaggtggcagagtggcgctacggtccggcccagctctggtacgacatgatgggggtc
cctgacgatggcagtggcttccactacggcttcaaactgaaggaggaggaggacgatgaa
caggagaaacgggagaggccagaaccaccgccacctttacaacatcccaaagaggagggc
agtggtgacgaaaaggacaaacaggccctggagaatgagctcttcctgatggtcacccag
cttcagtgggaggacgacatcatttggaatggagaggacgtgaaacacaagggcactaag
acccagcgagccagtctggcagggtggctgccttccagcatgacccgcaacgccaatgcc
tacaacgcacagcagggtattcatgatgtctatctacactctacaggtctgagtaggagt
aactcacagctggtgccccccactcctccacccatgcccaaagccccttccatcggctct
ggctccaagagggacaaacaccaccacgaccatcatgccactcatgaagaggatgccccc
tggttctccatcttccctattgacaatgaggagctggtgtacgggcgctgggaggacaac
atcatctgggatgaccaggccatggaccgcatgctctcaccccctgtcctcaccctagac
cccaacgatgagaacataattttagaaatcccagatgagaaggagtctgagcgtatgtcc
cactctccgtctaaggagaacaagaaggagtcatcactaaagaagagtcgcatcctgttg
gggaagactggggtcataaaagatgagcctcaacagaacatgtcccagcctgaggtgaag
gacccatggaacctgtccaatgatgagttctattatcctaagcagcaaggcctgaggggc
acctttggtggcaacatcattcagcactccatccctgcagtggagctgaggcagccgttc
ttccctactcacatgggacctatgaagctgcgtgggttccaccggccctctctgaagaag
tactcattcgggacgttgtcccagccaggtccccacgcagcccagcctctactcaaacag
atcaagaagaaggccaagatgcgagaacaagagcgccaggcttccggtggaggtgacatg
ttcttcatgcgtacagctcaggacctgacagggaaagacggcgacctgattctggcagag
tacagcgaggaatatcctccactcatcatgcaagtcggcatggcaaccaagatcaagaac
tactacaagagaaaaccagggaaggaccctggagctccagactgtaagtacggagagacc
gtgtactgccacacctcacctttcctgggctccctgcaccccggacagctgctgccggct
tttgagaacaaccttttccgtgcccccatctacctccacaagatgccagagacagatttc
ctggtgctgcgtacacggcagggctacttcattagagagctggtagatatctttgtggtc
ggccagcagtgtcccctctatgaggtccctggacccaactccaaacgagccaacacccat
atcagagacttcttgcaggtgtttatctatcggttgttctggaagagtaaagatcgtcct
aggagaatccgcatggaggacataaagaaagctttcccctcacattcagaaagcagcatc
cgcaaacgcctaaaactctgtgctgactttaagcgtacagggatggactctaactggtgg
gtgctgaagcctgacttcaggctgcctactgaggaggagatcagggccatggtgtctcca
gagcagtgctgtgcctactacagcatgctggtggcagaacaaagactgaaggatgctgga
tatggtgaaaagtccttctttgccccagaggaagagaatgaggaagacttccagatgaag
attgatgatgaggtccgcacagccccttggaacacgacgcgagccttcatcgctgccatg
aaggggaagtgtctgctggaggtcatgggggtggccgaccccacaggctgtggagaggga
ttctcttacgtcaaagtgcccaacaagcccactcaacaaaaggcccaagacgaccgggaa
ccacaacccgctaagaaaactgtgacagggacagacgctgatctgagaagactgtcactc
aaaaacgccaagcagctgctgcgcaagttctgtgttccagaggaggagataaagaagctg
tctcgttgggaggtgattgacgtggtgaggaccatgtccacagagcaggcccgctctggc
gaggggcccatgagcaagtttgcccgcgggtcccgcttctctgtagccgaacaccaggaa
cgctacaaggaggagtgccagaggatctttgacctgcagaacaaagtattggattccaca
gaggtcctgtccacagacacagacagcagctcagcggaggacagtgactttgaggagatg
gggaagaacattgagaacatgctgcagaacaagaagaccagttcccagctgtccagagag
agggaggagcaggagaggaaggagctgcagaggatgctgatgggagaggagagcgaccgc
gaccacaagggacgcaagggcttctccagtgccttgtccacaggctcccataaagatgac
gacacgtcctcggtcaccagcctgaactcgtccgctacgggacggcgcctcaaaatctac
cgcaccttcagggacgaagacggcaaggagtacgttcgctgtgagacggtccgcaaaccc
tccgtcatagacgcctacaccaggatcagaaccaccaaggatgatgagttcataagaaag
tttgctgtgtttgacgagcaacacagagaggagatgaggaaggagcggaggaggatccag
gaacagctgaggaggctgaagaggaaccaggagaaggaccggttcaagggccccccggag
aagaaggccaagaaggtcaaggagaggccagacctcaaggtaaaactgaagtgcggagct
tgcggtgccattgggcacatgcgaaccaacaagttctgcccgctatactaccagaccaac
gccccgccctccaacccggttgccatgacagaggagcaggaggaggagctggagaagact
gtaatccacaacgacaacgaggaactcatcaaggtggagggaaccaagatcgtcctcggc
aagcagcttatcgagagtgctgatgaggtgcgaaggaagtctctggtgctgaagttcccc
aaacagcatcttccccctaagaagaagagacgtgtgggaaccactgtacactgtgactac
ctcaataggccccacaaatccatccaccgccgacgcactgaccccatggtcactctgtcc
tcagtcctggagagcgtcatcaacgacatgcgggatcaccctaatacataccccttccac
acgccggtcaatgccaaggtggtgaaggactactataaggtcatccctcgtcccatggat
ctgcagacgctacgggagaatgtgcgtaagcgtgtatacccctcccgggaggagttcaga
gagaacgtggagctcattatcaagaacagcgccacatacaatggtgccaaacatccaata
acccaggtggcgcagacaatgctggacctttgtgatgagaaactgaaagagaaggaagac
aggctggtgagactggagaaagctatcaaccccctgctggacgatgacgaccaggtagcc
ttctccttcatcctggacaacatcgtcactcagaagatgatggccgtgcctgactcttgg
ccgttccaccatccagtcaacaagaagtttgttccagattactacaaagtgatagtccaa
cccatggacctggagaatgtccgcaagaacatatccaaacacaagtaccagaaccgggat
gtgttcctgtttgacgtcagcctggtccacaccaacagtgtcaagtacaacggtccagac
agtccttacaccaagacggccctggagatagtcaacgtgtgcaagcagaccctggcagag
tatgatgagcacctgacccagctggagaaggacatctccacagctaaagaggcagctctg
gatgcagcagacctggatagcctggaccccatgactcctggaacctacacatcacagcct
gccgatgtgtttgacagcagtgcctctgtgagcctgcacagagagaccagactcttctct
gaggttaaggcatctcttatgactgttccagagaagagggggttagggaagggtcgtcat
agaagactaggagaggaggagtcggacgtggacatcgagggcttcgaggaggaggagtat
gactgcaagcccaagacaccagctcctgctgaggatggtgagggagacctggaggatgag
gatgatgaagaggagatgctgttgccgccgccccgcagacgactgcagggccacaatgat
gatgattatgaagaggatgaagtcaccagtcggccagcccatgccagcgtgctgtaccag
gacctgctcatgtcagacggagaggatgatgccagcgaagaggagggagataacccgttc
tcctcgatccacctgtcagagagtggcagtgactcagacagagaggtggaagtgcgtccc
ccgccccctcccagacctcaccaagagacggcccgcatgggcctggagcaggacgacagc
atgatgtcatacggggaagatgtgccggatgagacccacctggaggacagtaatgtcagt
tatgggagctatgaggagccggagggtcagacccagacccagacctccagcatgggcaat
ggagagggctacggcatgagtgaggaagaggaggaagatgaggaggcagctcggaggaga
ggtcccagtgtgctttcccaggtgcagctgagtgaggatgaggaggacagtgaagagttc
aggtccatcgggggtgacagtgacatggactcagacaactag
DBGET
integrated database retrieval system
