Salvelinus fontinalis (brook trout): 129868987
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Entry
129868987 CDS
T11136
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04080
Neuroactive ligand-receptor interaction
sfon04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129868987
04082 Neuroactive ligand signaling
129868987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129868987
Ion channels [BR:
sfon04040
]
Ligand-gated channels
GABA-A
129868987
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
129868987
NCBI-ProteinID:
XP_055799372
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Position
13:complement(52696764..52708249)
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AA seq
475 aa
AA seq
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MNLVLLAFRLMCLAWLWPVTLLNGSHQPNKRRHKDVYLGENSKNQHGGRIDFKMKKSDST
KSLLIKSEQLLRIEDHDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYW
QDDRLAFPSSSKKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILY
SVRITVTALCAMDFSSFPLDTQKCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFF
IEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRA
VPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFT
TVEEMKKLKGGKIPADFNATQTMAFDGCYHDNDIDLTPFPELLSTPNTERSQTATSRNSA
AEPPPTEGTRLRRKKSIKHNLSFIMSNSYMIDSYSRVVFPMTYLMFNIIYWSLYS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggtgctcctggccttcaggctgatgtgcctggcctggctgtggcctgtaaca
ctactcaacggcagccaccaacccaacaagaggaggcacaaggacgtgtaccttggagag
aacagcaagaaccaacatggaggacgaatagactttaagatgaaaaagtctgacagcacc
aagtccctgctaattaaatctgaacagctgctccgtatcgaggaccatgactttgcaatg
cggcctggctttggaggggcagctattcctgtgggcatagacgtgcaggtggaaagcatt
gacagtatatctgaagtcaacatggacttcaccatgactctgtacctgagacactactgg
caggacgatcggctggcctttccttccagcagcaaaaagagccggacatttgacgctcgg
ctggtgaagaagatctgggtgccggacgtgttctttgtccactccaaacgttccttcatt
catgacacgaccatggagaacatcatgttgagggtgtaccctgacggcaacattctctac
agtgtcaggatcactgtgactgctctttgcgccatggacttcagtagctttcctttggac
acacagaaatgctctctggaactggagagctatgcgtacaatgagaacgacctcatgctc
tactggaagaacgggaacgattcattaaggactgatgagatcgttctctcacagtttttt
attgaagaattccacccttcctacgggcttgccttctacagcagcacgggttggtataac
aggctctacataaacttcatcctcaggaggcacatcttcttcttcatgctgcagacctat
ttccccaccatgctgatggtgatgctctcctgggtgtccttctggattgacaggagggct
gtgcctgccagagtgtcactgggtatcacaacagttctgaccatgtccaccatcatcaca
ggcgtgtcagcctccatgcctcaggtgtcttatgtaaaagctgtggacatctacctgtgg
gccagctttctgttcgtcttcctgtccgtcattgagtacgccgctgtcaactacttcacc
acggtggaggagatgaagaagctcaaggggggaaagatccctgcagatttcaatgccact
caaactatggcttttgacggatgttaccatgacaatgacattgatctgacacccttccca
gagctcctcagcacccccaacacagagcggagtcagacggccacgtcgaggaactctgct
gcagagcccccacccacagagggcaccaggctacgacgcaaaaaatccatcaaacacaac
ctcagcttcatcatgagtaacagctacatgattgactcctactccagagtcgtcttcccc
atgacttacctgatgttcaacatcatctactggagcctgtactcatga
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