Salvelinus fontinalis (brook trout): 129869413
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Entry
129869413 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129869413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129869413
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129869413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
129869413
NCBI-ProteinID:
XP_055799781
LinkDB
All DBs
Position
14:complement(3827281..3957018)
Genome browser
AA seq
1490 aa
AA seq
DB search
MGLSCSFIDSNYYKDHQGARSVSVATETSPPTLGFPSRYRDSPQHSSQLHPNPHPYPYPY
QETENKSIPHHTIVVTQFNPNLSLSGSAMDGYNSESVDPVGVVSTMVNLNGPGGQGDMMD
SDRESFPILIRSMSTSRRHSLGMPMSPIDLGRRLSLDAIDSDGERDDSPSHLQAFIYPGC
PEQEVEESDGTDLSRSEAKETETEECSRSGRTYSRTEILATDERVHVAHVSRVVETSKRA
AGEELDPEEANLHTAEGQSHIARQRTTRPEGKETGSSVTWYEFLSNENEEEEDRTEKVEK
GTKVKRTLSSLRNRMTGSFNKDKGKNREKEQQKGKEREPKEKEKLHHSSSSGHNLVPGSF
SSCATCSLCSKALQKKHGLQCLNCAVNVHRSCRTLLAECNSSKNKKDSLHRTSTAASPNL
ALRDRDQSSSALDCPFGTPRIPGMTLTPRGPSAQPASAAFNSSSSSHTAAASLNHSHNSR
TGSLSGDMDEPDSLRFAVKRLNEDAVSLAPSTTESIVVEDAYYSAFRADLESDAQDLEVE
SWSLAVDQQYLKKYTKEMVKRQDVIYELMQTEMHHVRTLKIMLRVYMRELKEHLQMDELF
PRLESLLELHTNFLSRLKERRRDSTQPGSDRNYNIQRLADILTTQFSGEKGDRLKENYGD
FCSHHTEAVNYYKEQLHNNKKFQNLIRKVNNLSVVRRLGVTECILLVTQRITKYPVLVER
IVQNTEVGTEEHEELTRSLGLIKDCIVQVDALVNLHEKASRLRDIAHKMEPKSLGKIKDG
RVFHREDLAQGRRRLLHEGTANHKAASGRLKDIVAVLLSDVLLLLQEKDQRYVFSTVDNK
PSVISLQKLIVREVAHEERAMFLICASSNEPEMYEIHTASKEERNSWMTHIRQAVESCPH
TEERLFSEQEEARAARFNEFQECLSQKDAQIVTFLTEKLQLFSDMCLVSGHEDTTFRSRL
MLRGDASDLHQGETLLKGTITDVESLQNLLLSGVREPASRLQEGSGSGALPRRADTFGGY
DSRPIILNKSIVKKKKHSGGGMARDGTQKGCSDPQLTKIQASQTLEQPQADDDDEEEKEE
ASPATWNPIWSNTFPEAEFFDRVLMLSQRLYSLQAIIAKQDSHIELQRASLTERASFPGR
HRGNVLLEQEKQRTLALQREELASFHKLQSQHRQEQARWERERERHRLQAEAMEGMLRQR
EENCRRLEEKLAEEREDLERQRETYQQDLERLRESTRTVEKEKERLEQQRKIKRKTIEVM
PFSGSLNGDLLLGVGSSGSVGSDLSVPQKALVRSSPSVAPADYLERPEVLARGQGANATA
LPVKKEVPLHLCSTTNQQHKQVGVQQQIPTKLAALSSKNSKSAKATHRTDSTASLDMKQM
LPMKLSAREDGTLKAKRSISPNQQFPHTLVHSQSMHLTVSLSPPDRGPENQPAGLQKPPS
QASNPLHVHTQPQAPNPLHTQSPNPLPAQAPVHGHSLPPPGRISEDVIFF
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaagctgctccttcatagactcaaactattacaaagaccatcaaggggcacgc
tctgtatcggttgccacagaaaccagccctcctaccctgggctttcccagtagatataga
gacagtccccagcacagctcccagctccatcccaatccacatccctatccatatccctat
caagagactgaaaacaaatccataccccatcacactattgtggtcacccagttcaaccct
aacctgtcgctgtcaggcagtgccatggacggctataacagtgagtcggtggaccctgtg
ggtgtggtgagcactatggtgaatctgaatggaccaggaggacaaggagacatgatggat
tctgacagagagagcttccctatcctgatcaggtccatgtctacatcacggagacacagc
ttgggcatgcccatgtctcccatcgacttggggaggaggctgagcctggatgccatagac
agcgatggagagagggatgactctccctcccacctacaggcctttatatacccaggatgc
cctgagcaggaagtggaggagtcagatgggacagacctctccagatctgaagccaaggag
acagaaacggaggagtgcagtcggtctggaaggacatactccagaacagagattctggcc
acagatgagcgtgttcacgttgcacacgtgtctcgcgtggtggagacatctaagagggca
gcaggagaggagctggacccagaggaagccaacttgcacactgcagaaggacagagtcat
atagccaggcagaggaccacaaggccagaggggaaggagacaggaagtagtgtcacctgg
tatgaatttctctccaacgaaaatgaggaagaggaggaccgaacagagaaagtggagaag
ggaaccaaagtaaagcgcaccctgagctcgcttaggaacagaatgactggctcattcaac
aaagacaagggtaagaaccgagagaaagagcagcagaaggggaaggagagggaacccaaa
gagaaagagaaactgcatcacagtagtagcagtgggcataatttggtgccaggctccttc
tctagctgtgccacctgctcactgtgcagtaaggccctgcagaaaaagcatggtctgcag
tgcctgaactgtgcagtgaacgttcacaggagttgtcggacgctactagctgagtgtaac
agcagcaagaacaagaaggattctctgcataggacctccacagcagcgtcgccgaacctc
gccctgagggatcgggaccagtcttcttcggcccttgattgccccttcggtactccgcgc
atcccaggcatgaccctcaccccgcggggacccagtgctcagcctgcctcagccgccttc
aacagctcttcctccagccacactgctgcagccagcctcaaccacagccacaacagccgc
accggatccctctcaggggacatggacgaaccggacagcctacgcttcgcggtcaagcgc
ttaaacgaggacgccgtctccctggccccttccaccactgagtccatcgttgtagaagat
gcgtactactctgcatttcgagctgatctggagtctgatgcccaggacctggaggtggag
tcatggagtctggctgtggaccagcagtacctgaagaaatataccaaggagatggtcaag
agacaggacgttatctatgagctgatgcagacagagatgcaccacgtgcggaccctgaag
atcatgctgcgtgtgtacatgagggagctgaaggagcacctccagatggacgagctgttc
ccgcgcctagagagcctgctggagctgcacacaaacttcctgtcccgcctaaaagagcgg
cgccgagactccacgcagcccggcagcgacaggaactacaacatacagagactcgctgac
atcctcaccacacagttttcaggtgagaaaggggaccggttgaaggagaactatggggat
ttctgcagccaccacaccgaggctgtcaactactacaaggagcaactacacaacaacaag
aagttccagaacctcatacggaaagtcaataatttgtccgttgtgagaagattaggagtg
acagagtgtattctcctggtgacacaacgcatcaccaagtaccctgtgctggtggaacgc
atcgtgcagaatacagaagtgggtacggaggaacacgaggagttgaccaggtctctgggt
ctgattaaagactgcatcgtccaggtggatgccctggtcaacctgcatgagaaggcctcg
cgcctccgagacatcgcccacaagatggagcccaagtccctcggcaagatcaaagatggc
cgtgtgttccacagagaggacctggcccagggtcgacgcaggctgctgcacgaggggacg
gccaaccacaaggccgcctccggcagactcaaagatattgtggctgtgctgctgtcagac
gtgctgctgttactccaagagaaggaccagagatatgttttctccacagtggacaacaag
ccctcagtgatctccctccagaagttgatagtgagggaggtggcccacgaggagagggcc
atgttcttgatctgcgcctcctccaatgagccggagatgtacgagatacacaccgcctcc
aaggaggagcgcaactcctggatgacacacatccggcaggccgtggagagttgtccacac
actgaggagagactcttcagtgagcaggaggaggctcgagccgccagattcaacgagttc
caagagtgtctgagccagaaggacgcccagatcgtgacgttcctgacagagaagctgcag
ctgttttcagacatgtgtctggtgtctggtcacgaggatacgaccttccgctcccgccta
atgctgcgaggtgacgcctcagacctccaccagggggagacactgctcaaggggaccatc
actgatgtggagagtcttcagaacctgttgctgtctggtgtgagagagccagcttcacgc
ctacaggagggttcagggtccggggctctgcccaggagagcagacaccttcgggggctat
gacagcaggcccatcatcctcaacaagagcattgtgaagaagaagaagcacagtggaggg
ggcatggccagagacgggacccagaaaggctgctctgacccccagcttacgaagatccag
gctagtcagaccctggagcaaccacaggctgatgatgatgatgaggaggagaaggaagag
gcctctccagccacctggaaccccatctggtccaacaccttccctgaggctgagttcttt
gaccgggtgctgatgctgtcccagagactctacagcctgcaggccatcatcgccaagcag
gacagccacatcgagctgcaacgtgcctccctcactgagcgcgcctccttccctgggcgt
catcgcggcaacgttctcctggagcaggagaaacagaggacgttggccctgcagagggag
gagctggccagcttccacaagctgcagtcacagcaccgtcaggagcaggctcgctgggag
agggagcgggagcgccaccggctgcaggccgaggccatggaggggatgctgaggcagaga
gaggagaactgcaggaggctggaggagaagctggcggaagagagggaggacctggagaga
cagagagagacgtaccaacaggatctggagagactgagggagtcgacccgcacagtggag
aaggagaaggaacgcctggagcagcagaggaagatcaagaggaagaccattgaggtgatg
cccttctctggcagtctaaatggggatctccttctgggcgtgggcagtagcggcagcgtc
ggatcagacctctccgtcccccagaaggcccttgttcgttccagcccttctgtggcgccc
gcagactacctggagcgtcctgaggttctggctcggggtcagggcgccaacgccacggcg
ctgccggtgaagaaggaggtgcctctccacctgtgcagcaccaccaaccagcagcacaag
caggtgggtgtccagcagcagatccccaccaagctggcagccctgagctcaaagaattcg
aagagtgccaaggccacccatcgcaccgacagcacagcctctctggatatgaagcaaatg
ctgcctatgaagttgtcagccagagaggacggcactctgaaagccaagcgctccatcagc
cctaaccagcagtttcctcacaccctagtccactcccagtccatgcacttgacagtttca
ttgagccctccagacagggggccagagaaccagcccgccggcctacagaagccccccagc
caggcctccaaccccctgcacgtccacacccagccccaggctcctaaccccctccacacc
cagagccctaacccccttcctgcacaggcccctgtccacggccacagcctgccccctcca
ggcaggatctccgaggatgtaatcttcttctga
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integrated database retrieval system
