Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0481
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Entry
SFyv_0481 CDS
T03315
Name
(GenBank) IspA
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00900
Terpenoid backbone biosynthesis
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
Module
sfs_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SFyv_0481
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfs01006
]
SFyv_0481
Enzymes [BR:
sfs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SFyv_0481
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SFyv_0481
Prenyltransferases [BR:
sfs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SFyv_0481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Met_synt_B12
Motif
Other DBs
NCBI-ProteinID:
AIL39211
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All DBs
Position
complement(369056..369955)
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AA seq
299 aa
AA seq
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MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDANMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQALKQLAEQSLDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggtggtaagcgcctgcgacctttcctggtttatgccaccggtcatatgtttggc
gttagcacaaacacgctggacgcacccgctgctgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattctaagcgatgccaatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgtcaggcgctgaaacaactggctgaacag
tcactcgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
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