Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0853
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Entry
SFyv_0853 CDS
T03315
Name
(GenBank) ornithine decarboxylase, inducible
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00330
Arginine and proline metabolism
sfs00480
Glutathione metabolism
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SFyv_0853
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SFyv_0853
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SFyv_0853
Enzymes [BR:
sfs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SFyv_0853
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIL39492
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Position
631201..632916
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AA seq
571 aa
AA seq
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MSELKIAVSRSCPDCFSTHRACVNIDESNYIDVAAIILSVNDVERGKLDKIDATGYGIPV
FIATENEERVPAEYLPRISGVFEHCESRKEFYGRQLETAASHYETQLRPPFFRALVDYVN
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM
WMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHS
FEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNAIL
FLLTPAEDMAKLQQLVPCWYASKNCLSPTRH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattaaaaattgccgttagccgttcttgcccggattgtttttccactcatcgt
gcatgcgtgaatattgacgaaagtaattatattgacgttgccgccattattttatcagtc
aatgatgttgaacgtggaaaactcgataaaatagacgctactggctatggcattcctgtt
tttattgcaacggaaaatgaagaacgtgtaccagcagaatatctgccacgtatttctggt
gtcttcgagcattgcgaatcacggaaagagttttatggacgtcagttagaaaccgctgct
agccattatgaaacgcaactgcgcccgcccttcttccgcgcactggtcgattatgtcaat
cagggcaatagcgcttttgactgcccgggtcatcagggaggtgagtttttccgtcgtcat
ccggcagggaatcagttcgtggagtacttcggagaaacgctgttccgttccgacttatgc
aacgcagacgtagcaatgggcgatctgctgattcacgaaggcgcgccatgcattgcacag
caacatgcggcaaaagtgtttaatgccgataaaacatacttcgttctaaatggcacttca
tcttctaacaaagtggttttaaacgccctgctaacaccgggtgatctggtgctgtttgat
cgcaataaccacaaatctaaccaccacggagcgttgctacaggctggtgcaacaccggtt
tatctggaaacggcacgtaacccgtatggctttatcggtggcattgatgcgcactgtttt
gaagaaagttacctgcgtgagctgatcgcggaagtcgcaccgcagcgggcaaaagaggct
cgtcctttccgcctcgctgtgattcagttaggcacctacgacggtacgatttataacgcc
cgccaggtggtggataaaattggtcatctgtgtgactacattctgtttgactccgcatgg
gttggctatgagcaatttatcccgatgatggctgactgttcgccgctgttgctggatctt
aatgagaacgatccgggtattctagttacgcaatccgtacataaacagcaggctggtttt
tctcaaacttcacaaatccataaaaaagacagccacatcaaagggcaacagcgttatgta
ccgcacaaacgcatgaacaacgcctttatgatgcacgcctccaccagcccgttctatccg
ctgtttgccgcactggatatcaacgccaaaatgcatgaaggtgtcagcggtcgtaatatg
tggatggattgtgtggtaaatggcattaatgcccgcaaactgatcctcgataactgtcag
catattcgtccgttcgtacctgaactggtggatggtaaaccctggcagtcgtatgaaaca
gcgcaaattgcggttgatctgcgcttcttccagtttgtaccaggggaacactggcattct
tttgaaggctatgcagagaatcaatactttgtcgatccttgcaaactgttgctgacaacc
ccaggtattgatgcacgtaacggcgaatatgaagcgttcggtgtacccgcgacgattctt
gctaacttcctgcgcgaaaatggcgtagtgccggaaaaatgcgatcttaacgccatcctc
ttcctgctgactccggcagaagatatggccaaacttcagcaacttgtgccctgctggtac
gcttcgaaaaactgcttgagtccgacgcgccattag
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