Sorex fumeus (smoky shrew): 130016183
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Entry
130016183 CDS
T10594
Symbol
TAPBPL
Name
(RefSeq) tapasin-related protein isoform X1
KO
K28445
tapasin-related protein
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04612
Antigen processing and presentation
sfum05163
Human cytomegalovirus infection
sfum05168
Herpes simplex virus 1 infection
sfum05169
Epstein-Barr virus infection
sfum05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
130016183 (TAPBPL)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
130016183 (TAPBPL)
05168 Herpes simplex virus 1 infection
130016183 (TAPBPL)
05163 Human cytomegalovirus infection
130016183 (TAPBPL)
05169 Epstein-Barr virus infection
130016183 (TAPBPL)
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Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
C1-set
Ig_3
Ig_2
ig
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
130016183
NCBI-ProteinID:
XP_055962830
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MGTEAGWCLLLCLALWGEAVPTDRLWRPVDVIFDCLLAKEGGPRAGFTSSEDRAKAVLVL
RQVPVLDDGSLEGFTDFQGDQLSKDDPPVTFEASVDLVQIPQAGDLLHAECNEKQVTCEF
SRYFLQAGPETAVDTAAYFLASVQVSEGGPSISMVMRTLGEVDKGNAWHPTLNLPLSPQG
TVKTAVQFQITTQTPTLTSPLGSSVSLHCGFSKAPDQALLSVEWRLQHQGHGRLVYRWIR
GQRRVERPGATLEPEPLLEAGDASLSLPDLVVGDEGTYICQVTTSQYQAQQIAQLHIRAS
PKVRLNQETKSLPPTLTCHVTGYYPLDVAITWTREEPGSPPAPVPEASFSSLRQSAAGTY
SISSSLTADPGPAGAMYTCQVTHVSLEEPLRASTWVAPPEQRTIFGALFASCLFVLTLWL
LVLQRRQATSPRSAKTLRASG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggcacggaggccgggtggtgcctgctgctctgcctggctctctggggagaggcggtg
cccacagacaggctgtggcgcccggtggatgtgatcttcgattgtctcctggccaaggaa
ggcgggccgagagcaggtttcactagcagtgaggacagggcgaaggccgtgctggtgctc
agacaggtgcccgtgctggacgatggctccctggagggcttcaccgacttccagggggac
caactatccaaggatgacccacctgtcacctttgaggcctcagtggacctcgtccaaatc
ccccaggccggggacctcctccacgcagagtgcaacgagaagcaggtgacctgtgagttc
tcgcgctactttctccaggcggggccggagaccgcagtggacacagcagcctacttcctg
gccagcgtgcaggtgtccgagggcggtccaagcatctccatggtgatgaggacgctcggg
gaggtggacaaagggaacgcctggcatcccacgctaaacctgcccctgagtcctcagggt
actgtgaagactgcagtgcaattccagataaccacccagacccccaccctgacttctccg
ctggggtcctcggtctccctgcactgcggcttctccaaggcaccagaccaggccctgctc
agcgtagagtggcggctgcagcatcagggccacgggcggctggtgtaccgctggatccgg
ggacagaggcgggtagagcggccgggtgctaccctggagccggagccactgctggaagcg
ggcgacgcctccctcagcctccccgacctcgtcgtgggggacgagggcacctacatctgc
caggtcaccacctcccagtatcaagcccagcagatcgcccagctgcacatccgagcatcc
cccaaagtccgactgaaccaagaaactaaaagcctgcctcccactctcacctgccacgtc
actggctactaccctctggacgtggccatcacctggacgcgagaggagccgggcagcccc
ccggcccctgtccctgaggcctccttctccagtctacggcaaagtgcggccgggacctac
agcatctcctcctccctcactgctgaccccgggccagcgggtgccatgtacacctgccag
gtcacccacgtgtccttggaggagcctctgcgagccagcacctgggttgccccaccagag
cagagaaccatcttcggcgccctcttcgccagctgcctcttcgtcctcaccctgtggctc
ctggtgcttcagaggcggcaagcgacctccccgaggtctgccaagacgctgagggcctcc
gggtaa
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