Sorex fumeus (smoky shrew): 130019774
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Entry
130019774 CDS
T10594
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
130019774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130019774
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130019774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
130019774
NCBI-ProteinID:
XP_055966394
LinkDB
All DBs
Position
Unknown
AA seq
2007 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNVTSFFNNSL
DGNGTAFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGL
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEEVVRKSESVDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSTVSQASRASRVIPILPMNGKMHSAVDCNGVVSLVGGP
SALISPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPATRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEHFSNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQRGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATT
SSSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLR
KTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVS
VVNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVE
LQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQE
MTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFAKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRR
YLLKQKVKKVSSIYKKDKGKEGEGTPIKEEIIIDKLNENSTPEKTDMTPSTTSPPSYDSV
TKPEKEKFEKDKSEKEDKAKDIRESKK
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcacttgctgctattgaacaacgaattgccgaagaaaaagcaaagagacccaaacaagag
cgcaaagatgaggatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatctatggagacatacctccagagatggtgtcagagccactggaggac
ctggacccatactatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tcacgattcagtgccacctctgccctgtacattttaactcccttcaaccctattagaaaa
ctagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagattggacaaaaaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatactcgcaaggggtttttgt
ttagaagattttacatttctacgggatccatggaactggctggatttcacagtcattact
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgttggggcc
ttgatccagtcagtgaagaagctctcagatgtaatgattctgactgtgttctgcctgagt
gtgtttgcactaataggactacagctgtttatgggcaatttgcggaataaatgtttgcaa
tggcccccggataattcttcctttgaacttaatgtcacttccttctttaataactcattg
gatgggaatggtactgctttcaataggacagtgagcatgtttaactgggatgaatacatt
gaggacaaaagtcacttttattttttggaaggacaaaatgatgctctactttgtggcaac
agctcagatgcaggccagtgtccggaaggctatatctgtgtgaaagctggtagaaatccc
aactatggctacacaagttttgacacctttagttgggctttcttgtccttatttcgtctc
atgactcaagatttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgcttgtcattttcttgggctcattctaccttataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaacacttgaagaggctgaa
cagaaagaagctgaatttcagcaaatgcttgaacaattaaaaaagcaacaagaagaagca
caggcagcagctgcagcagcatctgctgaatctagagacttcagtggtgcaggaggactg
ggagtattctcggagagttcttcagtggcatcaaagttgagttccaagagtgaaaaagag
ctgaaaaacagaaggaagaaaaagaaacagaaagaacagtctggagaagaagaaaaggaa
gaagtagtccgaaaatctgaatctgtagacagcataagaaggaaaggtttccgtttttcc
ttagaaggaagtaggctgacatatgagaaaagattttcttctccgcaccaatctttattg
agcatccgtggctcgctcttctctccaagacgcaacagtagggcaagccttttcagcttt
agaggcagagcgaaggatattggctctgaaaacgactttgccgatgatgagcatagtacc
tttgaagacaatgacagtcggagagactctctgtttgtgccacacagacatggggagcgt
cggcacagcacggtcagccaggccagccgcgcctccagggtgattcccattcttcccatg
aatggcaagatgcacagtgctgtggattgtaacggtgtggtttccctcgtgggaggtcct
tctgctctcatatctccggctgggcagctcttgccagagggcactacaactgaaacagaa
ataagaaagagacggtccagttcttatcacgtttcaatggatttgttggaagatcctgcc
acaagacaaagagcaatgagtatggccagtattttgaccaatactatggaagaactcgaa
gaatccagacagaaatgtccaccctgttggtataaatttgctaacatgtgtttgatttgg
gactgctgtaaaccatggttaaaggtgaaacatatagttaacttggttgtgatggaccca
tttgttgatctggccatcaccatctgcattgtcttaaacacactcttcatggccatggag
cactatcccatgacagaacatttcagcaatgtgctatcagttgggaacctggtcttcact
ggaatatttactgcagaaatgtttctcaaaataattgctatggatccatactattacttt
caagaaggctggaatatttttgatggtttcattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttctccgatcatttcgactgcttcgagttttcaag
ttagccaagtcttggccaactctgaacatgctgataaagatcattggaaattctgtgggg
gctctgggtaacctcactttggtgttggccatcatcgtcttcatttttgctgtggttggc
atgcagctctttggtaaaagctacaaagaatgtgtctgcaagatctccaatgactgtgaa
ctcccacgttggcacatgcatgacttcttccactccttcctgattgtgtttcgtgtgttg
tgtggagagtggatagaaaccatgtgggactgtatggaggtcgctggccaaaccatgtgc
cttactgtgttcatgatggtgatggtgattggaaacttagtagttctgaaccttttcctg
gccttgctcttgagttcattcagttctgacaatcttgctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagagaggaatagattatgttaaaagg
aaattacgtgaatttattcaaaaagcatttgttagaaagcaaaaagctctagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccacactactata
gaaataggcaaagacctcaattatctcaaagatggaaatggaacaactagtggtataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtcatttataaataacccc
agccttactgtgaccgtaccaattgctgttggagaatctgactttgaaaatttaaacaca
gaagaattcagcagtgagtcagatatggaggaaagcaaagagaagctaaatgcaactact
agttcatctgaaggcagcacagttgatataggagctcccgctgagggagaacagcccgaa
gctgaacccgaagaatcccttgagcctgaagcctgctttacagaagactgtgtacggaaa
ttcaagtgttgccagataagtatagaagaaggcaaaggtaaactctggtggaacctgaga
aaaacttgttataagatagtggaacacaactggtttgaaaccttcattgttttcatgatt
ctgctcagcagtggggcactggcctttgaagatatatatattgagcagcgaaaaaccatt
aagaccatgttagaatatgctgataaagttttcacttacatatttattctggaaatgctt
ctaaagtgggttgcatatggttttcaagtatattttaccaatgcctggtgctggttagat
tttctgattgttgatgtttcattggtcagcttaactgcaaatgccttgggttactcagaa
cttggtgccatcaagtccctgagaacacttagggctctgaggccactgagagccttgtct
cggtttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatctataatg
aatgttcttctggtttgtctgatcttttggctaatattcagtattatgggtgtgaatctt
tttgctggcaagttttatcactgtattaattacaccactggagaaatgtttgatgtaagt
gtggttaacaactacagcgaatgtcaagccctcatagagagcaatcaaactgccaggtgg
aaaaatgtgaaagtaaacttcgataacgtgggacttggatatctttctctgcttcaagta
gctacatttaagggatggatggatatcatgtatgcagcagttgactcacgaaatgtagaa
ttacaacccaaatatgaagacaatctgtacatgtatctttattttgttatctttattatt
tttggttcattcttcactttgaatcttttcattggtgtcatcatagacaacttcaaccaa
cagaaaaaaaagtttggaggtcaagatatttttatgacagaagaacaaaagaaatactac
aatgcaatgaaaaaactaggctcaaagaaaccacaaaagcctatacctcggcctgctaac
aaattccaagggatggtctttgactttgtcaccaaacaagtctttgacatcagtatcatg
atcctcatctgtctcaacatggtcaccatgatggtggaaacagatgaccagagtcaagaa
atgacaaacattctatactggattaacctagtgtttattgttctgttcactggagaatgt
gtgctcaaactaatctctcttcgttactactatttcaccattggatggaatatatttgat
tttgtagtggtcattctctccattgtaggtatgtttctggcagagctgatagaaaagtat
tttgtgtctcctaccctattccgagttatccgtctggccaggattggtcgaatcttgcgt
ctcatcaaaggggccaaggggatccgcactctgctctttgctctgatgatgtccctccct
gccttgtttaacatcggcctcctgctctttctggtcatgttcatctacgccatctttgga
atgtccaattttgcctacgttaagagagaagttggaattgatgacatgttcaactttgaa
acctttggcaacagcatgatctgcctgtttcagatcaccacctctgccggctgggatgga
ttgctagcacctattcttaatagcggacctccagattgtgaccctgaaaaagatcaccct
ggaagctcagttaagggagactgtgggaacccatctgttgggattttcttctttgtcagt
tatatcatcatatcatttctggttgtggtgaacatgtacatcgctgtcatcctggagaac
ttcagtgttgctactgaagaaagcgcagagcccctgagtgaggatgactttgagatgttc
tatgaggtttgggagaagtttgacccggatgccacccagtttatagagttcgctaaactc
tccgattttgcagctgccctggatcctccgcttctcatagcaaaaccgaacaaagtccag
ctcattgccatggatctgcccatggtcagcggggaccgaatccattgcctggacatatta
tttgccttcacaaagcgcgttttgggtgagagtggagagatggatgccctacgaatacaa
atggaagagagattcatggcatcaaacccctccaaagtctcctatgagccgattaccacc
actttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgc
tatctcttgaagcaaaaagttaaaaaagtttcaagtatatataagaaagacaaaggcaag
gaaggagaaggaacacctatcaaagaagagatcatcatcgacaagctgaatgagaattca
actccagagaagaccgatatgacaccttccaccacttccccaccttcatatgatagtgtg
accaagccagaaaaggaaaaatttgaaaaagacaagtcagagaaggaagacaaagcaaaa
gatatcagggaaagtaaaaagtaa
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